Factsheet for Os01t0211800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G040920.8	Barley	nucleus	80.91	85.3
TraesCS3D01G148200.1	Wheat	nucleus	69.39	75.08
TraesCS3B01G167500.1	Wheat	nucleus	64.85	73.29
TraesCS2D01G144300.1	Wheat	nucleus	66.97	72.22
TraesCS2B01G165700.1	Wheat	nucleus	66.97	71.99
TraesCS2A01G140900.1	Wheat	nucleus	65.15	70.26
Zm00001d039383_P001	Maize	nucleus	61.21	70.14
TraesCS3A01G131900.1	Wheat	nucleus	66.67	69.18
GSMUA_Achr6P26930_001	Banana	nucleus	47.27	61.66
GSMUA_Achr9P06540_001	Banana	nucleus	44.85	60.66
EES00074	Sorghum	nucleus, plastid	66.67	53.4
Os01t0756200-01	Rice	nucleus	40.91	50.94
VIT_19s0014g01780.t01	Wine grape	nucleus	45.45	48.54
KRH22014	Soybean	nucleus, plastid	46.67	48.12
KRH27307	Soybean	plastid	41.52	48.07
PGSC0003DMT400032381	Potato	nucleus, plastid	38.79	44.29
Solyc07g062710.2.1	Tomato	nucleus, plastid	40.3	44.04
Os12t0194600-01	Rice	nucleus	25.45	22.76
Os11t0160500-01	Rice	nucleus, plasma membrane	16.06	22.46
Os11t0218000-01	Rice	nucleus	23.94	21.7
Os02t0538900-01	Rice	mitochondrion, nucleus	20.3	20.55
Os03t0336200-02	Rice	nucleus	19.7	19.76
Os09t0516200-01	Rice	nucleus	22.12	19.21
Os12t0162500-01	Rice	plasma membrane	18.48	18.6
Os10t0531900-01	Rice	nucleus	20.61	17.0
Os08t0543900-00	Rice	nucleus	23.64	16.81
Os03t0127500-00	Rice	nucleus	20.3	15.73
Os04t0181300-00	Rice	nucleus	16.67	12.91
Os09t0520400-01	Rice	nucleus	16.67	12.33

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EMBL:AK100944	ProteinID:BAD73033.1	ProteinID:BAF04289.1	ProteinID:BAS70994.1
GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0045893
InterPro:IPR004827	EnsemblPlantsGene:Os01g0211800	EnsemblPlants:Os01t0211800-01	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR13301	PANTHER:PTHR13301:SF134	UniProt:Q5QNI5	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000048DE4C
InterPro:bZIP	SEG:seg	:	:	:	:

Description

b-ZIP TRANSCRIPTION FACTOR 2Similar to VirE2-interacting protein VIP1. (Os01t0211800-01)

Coordinates

chr1:-:6094692..6096528

Molecular Weight (calculated)

35693.6 Da

IEP (calculated)

7.506

GRAVY (calculated)

-0.870

Length

330 amino acids

Sequence
(BLAST)

001: MAQLPPKIPT MATAWPEFGG GHHHHAAHGH HHQRSPSMGA FLAAPLPPFP LPPPAPANGG AQQQQQQQQH QPSWVDEFLD FSATKRGAHR RSVSDSVAFL
101: DPVSDDNAGV GAHDFDRLDD DQLMSMFSDD LQPPPPQQQP AAPAASASSP SDHNSMNDEK QDKGETDEAQ SECDGATPGQ PASPATVDPK RVKRILANRQ
201: SAQRSRVRKL QYISELERSV TSLQTEVSAL SPRVAFLDHQ RSLLTLGNSH LKQRIAALAQ DKIFKDGGTE EGDREAAANL PPAKPQERGI PTGGRGPGPR
301: PRQCRPDRQR GGRRGRAMPA LVIGRDPDAL

Best Arabidopsis Sequence Match ( AT3G58120.1 )
(BLAST)

001: MAQLPPKIPT MTTPNWPDFS SQKLPSIAAT AAAAATAGPQ QQNPSWMDEF LDFSATRRGT HRRSISDSIA FLEPPSSGVG NHHFDRFDDE QFMSMFNDDV
101: HNNNHNHHHH HSINGNVGPT RSSSNTSTPS DHNSLSDDDN NKEAPPSDHD HHMDNNVANQ NNAAGNNYNE SDEVQSQCKT EPQDGPSANQ NSGGSSGNRI
201: HDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTSLQTE VSVLSPRVAF LDHQRLLLNV DNSAIKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ
301: SLKKMENNVS DQSPADIKPS VEKEQLLNV

Arabidopsis Description

BZIP61BZIP61 [Source:UniProtKB/TrEMBL;Acc:A0A178VLL5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.