Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g110480.2.1 | Tomato | nucleus | 98.96 | 98.11 |
| KRH24356 | Soybean | nucleus | 66.03 | 69.53 |
| KRH29330 | Soybean | nucleus | 66.03 | 68.4 |
| VIT_03s0038g00860.t01 | Wine grape | nucleus | 79.03 | 67.46 |
| PGSC0003DMT400009538 | Potato | nucleus | 39.69 | 51.58 |
| PGSC0003DMT400042946 | Potato | plastid | 24.96 | 44.44 |
| PGSC0003DMT400070968 | Potato | nucleus | 24.96 | 41.26 |
| PGSC0003DMT400074878 | Potato | mitochondrion, nucleus | 18.54 | 41.0 |
| PGSC0003DMT400045314 | Potato | nucleus | 21.14 | 37.42 |
| PGSC0003DMT400002100 | Potato | nucleus | 21.32 | 36.18 |
| PGSC0003DMT400024289 | Potato | nucleus | 14.21 | 27.06 |
| PGSC0003DMT400032381 | Potato | nucleus, plastid | 13.52 | 26.99 |
| PGSC0003DMT400020206 | Potato | nucleus | 13.69 | 25.9 |
| PGSC0003DMT400064169 | Potato | nucleus | 13.69 | 21.64 |
| PGSC0003DMT400024003 | Potato | nucleus | 12.48 | 20.75 |
| PGSC0003DMT400005064 | Potato | nucleus | 10.57 | 19.93 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:102598221 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | UniProt:M0ZN09 | PFAM:PF00170 |
| EnsemblPlantsGene:PGSC0003DMG400001659 | PGSC:PGSC0003DMG400001659 | EnsemblPlants:PGSC0003DMT400004178 | PFscan:PS50217 | PANTHER:PTHR13690 | PANTHER:PTHR13690:SF76 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000295C93F | RefSeq:XP_006359608.1 | InterPro:bZIP | SEG:seg |
Description
DNA binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400001659]
Coordinates
chr1:+:86886462..86889844
Molecular Weight (calculated)
63255.6 Da
IEP (calculated)
7.351
GRAVY (calculated)
-0.838
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGDNDEGNS DMVQRLQSSF GTSSSSLPKQ LQPISMNQLD IPQLTTSQFR GQMRQFSPNF GVENSKRVGI PPSHPQMPPI SPYSQIPVTR PGNQQMGMQN
101: FTSAGPSHSR SLSQPAFFSL DSLPPLSPSP YRESPSTSMS DPISADVSMG DQDGNSHSLL PPTPFSRCNS SRAGESLPPR KAHRRSNSDI PFGFSAIMQS
201: SPPLVPLRSP GALERSFPSR DNSGGKPVQL VKRESMWERG NDYNNVEGMG ERKSEGEVVD DLFSAYMNLD NIDAFNSSGT DEKLGIENRE DLDSRASGTK
301: TNGGDSSDNE ATSSVNDSSS GSMQKREGVK RSAVADIAPT TRHYRSVSMD SFMGKLNFID DSPKLPPSPG PRPGQLSPTN SLDGNSNSFS LEFGNGEFSG
401: AELKKIMANE KLAEIALADP KRAKRILANR QSAARSKERK MRYIAELEHK VQTLQTEATT LSAQLTLLQR DATGLTSQNS ELKFRLQAME QQAQLRDALN
501: EALTAEVQRL KIATAELSAD ASKFQQLSLN PQMFQSQQQQ SNQLNMHQLQ QQQQQQQQHA QARQQLNSST TSKHESK
101: FTSAGPSHSR SLSQPAFFSL DSLPPLSPSP YRESPSTSMS DPISADVSMG DQDGNSHSLL PPTPFSRCNS SRAGESLPPR KAHRRSNSDI PFGFSAIMQS
201: SPPLVPLRSP GALERSFPSR DNSGGKPVQL VKRESMWERG NDYNNVEGMG ERKSEGEVVD DLFSAYMNLD NIDAFNSSGT DEKLGIENRE DLDSRASGTK
301: TNGGDSSDNE ATSSVNDSSS GSMQKREGVK RSAVADIAPT TRHYRSVSMD SFMGKLNFID DSPKLPPSPG PRPGQLSPTN SLDGNSNSFS LEFGNGEFSG
401: AELKKIMANE KLAEIALADP KRAKRILANR QSAARSKERK MRYIAELEHK VQTLQTEATT LSAQLTLLQR DATGLTSQNS ELKFRLQAME QQAQLRDALN
501: EALTAEVQRL KIATAELSAD ASKFQQLSLN PQMFQSQQQQ SNQLNMHQLQ QQQQQQQQHA QARQQLNSST TSKHESK
001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.