Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400004178 | Potato | nucleus | 67.46 | 79.03 |
| Solyc01g110480.2.1 | Tomato | nucleus | 67.6 | 78.52 |
| KRH24356 | Soybean | nucleus | 60.21 | 74.27 |
| KRH29330 | Soybean | nucleus | 60.35 | 73.25 |
| VIT_18s0001g13740.t01 | Wine grape | nucleus | 13.91 | 71.21 |
| VIT_13s0067g02900.t01 | Wine grape | nucleus | 21.3 | 40.11 |
| VIT_06s0004g08070.t01 | Wine grape | plastid | 20.27 | 40.06 |
| VIT_05s0102g01120.t01 | Wine grape | nucleus | 23.82 | 37.88 |
| VIT_18s0076g00330.t01 | Wine grape | nucleus | 19.08 | 36.86 |
| VIT_12s0028g02590.t01 | Wine grape | nucleus, plastid | 11.98 | 27.46 |
| VIT_19s0014g01780.t01 | Wine grape | nucleus | 12.13 | 26.54 |
| VIT_12s0035g00620.t01 | Wine grape | nucleus | 13.46 | 24.33 |
| VIT_13s0073g00430.t01 | Wine grape | nucleus | 9.32 | 20.45 |
| VIT_18s0001g03010.t01 | Wine grape | nucleus | 7.84 | 19.49 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100255631 | wikigene:100255631 | MapMan:15.5.4.1 | ProteinID:CCB60697 | ProteinID:CCB60697.1 |
| ncoils:Coil | UniProt:F6I181 | EMBL:FN596508 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR004827 | EntrezGene:LOC100255631 | wikigene:LOC100255631 | PFAM:PF00170 | PFscan:PS50217 | PANTHER:PTHR13690 |
| PANTHER:PTHR13690:SF76 | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:TC66639 | UniParc:UPI000210A5A4 | ArrayExpress:VIT_03s0038g00860 |
| EnsemblPlantsGene:VIT_03s0038g00860 | EnsemblPlants:VIT_03s0038g00860.t01 | unigene:Vvi.7500 | RefSeq:XP_002269363 | RefSeq:XP_002269363.1 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:689247..693308
Molecular Weight (calculated)
73320.5 Da
IEP (calculated)
9.216
GRAVY (calculated)
-0.795
Length
676 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTKPTAISH SNAPLGKGKS REKLKVNRVQ GVHFFGISVA DRSYNPQQKN PFLGNSFGGA AAECGGDSLA NTVGPATGAP LLRFTSKMGD TEEANIDMIQ
101: RLQSSFGTSS SSIQKQPMSM NQLDIPQLNA SSQIRAPMMR HFSPNFSGDS SKRHGFPPSH PHQIPPISPY SQIPVPRPAN QQLVSQNFSP GPSHSRSLSQ
201: PSFFSLDSLP PLSPSPYRDS SSTSISDAVS ADISMEDRDA SSHSVLPPSP SPFSRGNSMR VGENLPPRKA HRRSSSDIPF GFSSIMQSSP PLIPLRGSGA
301: LERSMSGRDN NMAAAKPVQL VKRESSWERG GDSNAEGMGE RKSEGEVVDD LLSAYMNLDN IDALNSPGTE EKNGTENRED LDSRASGTKT NGGDSSDNEA
401: ESSVNESGNS MQKLGTSSSA EKREGVKRSA GGDIAPTTRH YRSVSMDSFM GKMNFGDESP KLLPSPGTRP GQLSPSNSMD GNSATFSLEF GNGEFSGAEL
501: KKIMANEKLA EIALTDPKRA KRILANRQSA ARSKERKMRY ISELEHKVQT LQTEATTLSA QLTLLQRDSA GLTSQNNELK FRLQAMEQQA QLRDALNEAL
601: TAEVQRLKLA TAELGGESQA SKCLVPQLSV NPQMFHLHHQ QPTQLNIHQL QQQQQQQHNQ QQQQNGSTTT KHESNQ
101: RLQSSFGTSS SSIQKQPMSM NQLDIPQLNA SSQIRAPMMR HFSPNFSGDS SKRHGFPPSH PHQIPPISPY SQIPVPRPAN QQLVSQNFSP GPSHSRSLSQ
201: PSFFSLDSLP PLSPSPYRDS SSTSISDAVS ADISMEDRDA SSHSVLPPSP SPFSRGNSMR VGENLPPRKA HRRSSSDIPF GFSSIMQSSP PLIPLRGSGA
301: LERSMSGRDN NMAAAKPVQL VKRESSWERG GDSNAEGMGE RKSEGEVVDD LLSAYMNLDN IDALNSPGTE EKNGTENRED LDSRASGTKT NGGDSSDNEA
401: ESSVNESGNS MQKLGTSSSA EKREGVKRSA GGDIAPTTRH YRSVSMDSFM GKMNFGDESP KLLPSPGTRP GQLSPSNSMD GNSATFSLEF GNGEFSGAEL
501: KKIMANEKLA EIALTDPKRA KRILANRQSA ARSKERKMRY ISELEHKVQT LQTEATTLSA QLTLLQRDSA GLTSQNNELK FRLQAMEQQA QLRDALNEAL
601: TAEVQRLKLA TAELGGESQA SKCLVPQLSV NPQMFHLHHQ QPTQLNIHQL QQQQQQQHNQ QQQQNGSTTT KHESNQ
001: MGDTEKCNSD MIQRLHSSFG TTSSSIPKNP ISQLDLNPNF IRSSAPQFSK PFSDSGKRIG VPPSHPNLIP PTSPFSQIPT TRQPGSHNFN PGGANHSRSM
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE
101: SQPNSFFSFD SLPPLSPSPF RDHDVSMEDR DSGVFNSNHS LPPSPFTRCN STSSSSLRVG ESLPPRKSHR RSNSDIPSGF NSMPLIPPRP LERSFSGGEC
201: ADWSKSNPFV KKESSCEREG VGEREAMDDL FSAYMNLENI DVLNSSEADD SKNGNENRDD MESSRASGTK TNGSDTEGES SSVNESANNN MNSSGEKRES
301: VKRRAAGGDI APTTRHYRSV SVDSCFMEKL SFGDESLKPP PSPGSMSRKV SPTNSVDGNS GAAFSIEFNN GEFTAAEMKK IMANDKLAEM AMSDPKRVKR
401: ILANRQSAAR SKERKMRYIV ELEHKVQTLQ TEATTLSAQL TLLQRDMMGL TNQNNELKFR LQAMEQQARL RDALNEALNG EVQRLKLAIG ESSQNESERS
501: KMQSLNAEMF QQLNISQLRQ QPQQMQQQSH QQNHQNGTMA TKSESNE
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q9T0J7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.