Factsheet for Solyc11g020950.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024003	Potato	nucleus	96.63	90.78
VIT_18s0001g03010.t01	Wine grape	nucleus	38.65	46.32
GSMUA_Achr8P29390_001	Banana	nucleus	44.17	39.34
Zm00001d041831_P001	Maize	mitochondrion	40.8	38.22
TraesCS4A01G204300.1	Wheat	nucleus	40.18	37.86
TraesCS4B01G108000.1	Wheat	nucleus	40.18	37.86
TraesCS4D01G105100.1	Wheat	mitochondrion	40.18	37.86
KXG23197	Sorghum	mitochondrion	41.72	37.67
Os11t0218000-01	Rice	nucleus	41.72	37.36
Zm00001d049135_P001	Maize	mitochondrion	39.88	37.25
GSMUA_Achr9P00300_001	Banana	nucleus	42.94	37.23
KXG28232	Sorghum	mitochondrion	40.8	37.15
Os12t0194600-01	Rice	nucleus	40.8	36.04
AT1G35490.1	Thale cress	nucleus	32.52	35.33
Solyc10g044830.1.1	Tomato	nucleus	26.38	34.82
HORVU5Hr1G031130.2	Barley	mitochondrion	37.73	34.17
CDY48939	Canola	nucleus	31.6	33.33
GSMUA_Achr3P02820_001	Banana	golgi	40.49	32.92
Bra034913.1-P	Field mustard	nucleus	22.39	32.88
HORVU4Hr1G016340.4	Barley	nucleus, plastid	40.49	32.04
CDX80717	Canola	nucleus, plastid	31.29	31.88
Zm00001d035240_P001	Maize	nucleus	20.86	30.09
Solyc11g006490.1.1	Tomato	nucleus	23.31	24.76
Solyc07g062710.2.1	Tomato	nucleus, plastid	21.78	23.51
Solyc07g053450.2.1	Tomato	nucleus	19.63	22.54
Solyc12g010800.1.1	Tomato	nucleus	20.86	22.22
Solyc06g049040.2.1	Tomato	nucleus	17.79	17.52
Solyc06g060490.2.1	Tomato	nucleus	14.72	17.33
Solyc04g071160.2.1	Tomato	nucleus	17.18	16.42
Solyc06g048630.2.1	Tomato	nucleus	17.48	16.33
Solyc04g081190.2.1	Tomato	nucleus	18.4	13.51
Solyc06g053350.2.1	Tomato	plastid	17.79	13.36
Solyc01g110480.2.1	Tomato	nucleus	21.17	11.86

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0000977	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0045893	InterPro:IPR004827	UniProt:K4D746	PANTHER:PTHR13301	PANTHER:PTHR13301:SF25
SMART:SM00338	SUPFAM:SSF57959	EnsemblPlantsGene:Solyc11g020950.1	EnsemblPlants:Solyc11g020950.1.1	UniParc:UPI000276965D	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:12975389..12977033

Molecular Weight (calculated)

37191.0 Da

IEP (calculated)

8.121

GRAVY (calculated)

-1.146

Length

326 amino acids

Sequence
(BLAST)

001: MDSTSPFLQS YVDSNMDGSN GKAKPTEGSS HHHRWNSESI LIEEQPSWLD DLLNEPPETT TVVHKGHRRS ASDTFAYVGA AAERLDTWEE PKNKNVNVGA
101: SWGSVNYVSY KDLSAVPYEP KPNSSHEQKF NKAAQELNGA PSVSHEKHNL REINNSKNQE GSNERSNNAQ AKHSMSKADA KRAKQQSAHR SRVRKLQHIA
201: ELERTVQALQ AEGSELSAEL EFVDQQNIIL SMENRALRQR LDSLSQEQLI KHLEQEMLER ELTRLQTMYQ MQRQQMQQQH QQPQQQNHSK HRRNKSRDLE
301: AQLANLSIKN NEANSSRAQV TGSVRM

Best Arabidopsis Sequence Match ( AT1G58110.1 )
(BLAST)

001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF

Arabidopsis Description

Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I9R1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.