Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400064169 | Potato | nucleus | 59.11 | 40.0 |
| VIT_12s0035g00620.t01 | Wine grape | nucleus | 53.85 | 35.56 |
| KRH59143 | Soybean | nucleus | 51.01 | 33.6 |
| KRH43037 | Soybean | nucleus | 50.2 | 32.98 |
| AT1G58110.2 | Thale cress | nucleus | 41.3 | 27.27 |
| CDY29162 | Canola | nucleus | 40.89 | 27.01 |
| CDY39913 | Canola | nucleus | 40.49 | 26.95 |
| TraesCS4D01G105100.1 | Wheat | mitochondrion | 37.65 | 26.88 |
| TraesCS4B01G108000.1 | Wheat | nucleus | 37.65 | 26.88 |
| TraesCS4A01G204300.1 | Wheat | nucleus | 37.65 | 26.88 |
| Bra027885.1-P | Field mustard | nucleus | 40.49 | 26.81 |
| Solyc11g020950.1.1 | Tomato | nucleus | 34.82 | 26.38 |
| GSMUA_Achr8P29390_001 | Banana | nucleus | 38.87 | 26.23 |
| Os11t0218000-01 | Rice | nucleus | 38.06 | 25.82 |
| Os12t0194600-01 | Rice | nucleus | 37.65 | 25.2 |
| CDY23807 | Canola | nucleus | 34.01 | 25.0 |
| Zm00001d041831_P001 | Maize | mitochondrion | 35.22 | 25.0 |
| AT4G06598.1 | Thale cress | nucleus | 26.72 | 24.91 |
| KXG28232 | Sorghum | mitochondrion | 36.03 | 24.86 |
| CDY46864 | Canola | nucleus | 33.6 | 24.85 |
| KXG23197 | Sorghum | mitochondrion | 36.03 | 24.65 |
| Zm00001d049135_P001 | Maize | mitochondrion | 34.41 | 24.36 |
| GSMUA_Achr9P00300_001 | Banana | nucleus | 36.44 | 23.94 |
| HORVU5Hr1G031130.2 | Barley | mitochondrion | 33.2 | 22.78 |
| HORVU4Hr1G016340.4 | Barley | nucleus, plastid | 37.65 | 22.57 |
| Bra035464.1-P | Field mustard | nucleus | 15.79 | 22.16 |
| Zm00001d035240_P001 | Maize | nucleus | 19.43 | 21.24 |
| GSMUA_Achr3P02820_001 | Banana | golgi | 34.41 | 21.2 |
| Solyc11g006490.1.1 | Tomato | nucleus | 19.43 | 15.64 |
| Solyc07g062710.2.1 | Tomato | nucleus, plastid | 19.03 | 15.56 |
| Solyc07g053450.2.1 | Tomato | nucleus | 17.81 | 15.49 |
| Solyc12g010800.1.1 | Tomato | nucleus | 19.03 | 15.36 |
| Solyc06g060490.2.1 | Tomato | nucleus | 12.15 | 10.83 |
| Solyc04g071160.2.1 | Tomato | nucleus | 13.77 | 9.97 |
| Solyc06g053350.2.1 | Tomato | plastid | 14.57 | 8.29 |
| Solyc04g081190.2.1 | Tomato | nucleus | 14.17 | 7.88 |
| Solyc06g049040.2.1 | Tomato | nucleus | 10.53 | 7.85 |
| Solyc06g048630.2.1 | Tomato | nucleus | 10.93 | 7.74 |
| Solyc01g110480.2.1 | Tomato | nucleus | 15.38 | 6.53 |
Protein Annotations
| MapMan:35.2 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0045893 | UniProt:K4CZK3 | PANTHER:PTHR13301 | PANTHER:PTHR13301:SF25 | EnsemblPlantsGene:Solyc10g044830.1 | EnsemblPlants:Solyc10g044830.1.1 |
| TMHMM:TMhelix | UniParc:UPI000276B1EA | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr10:+:28240052..28242839
Molecular Weight (calculated)
28072.8 Da
IEP (calculated)
6.704
GRAVY (calculated)
-0.738
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSPHQRTSS ESCLIEEEPS WLDDLLNDPE TPVRRGGHRR SSSDSFTCFD ASNIANLDYI AQDDNKFRNL THAPSWGSQD FDYYQNARHA TFHVDQNSSN
101: RSKSKARDVS PNAIPHPRGL SPFRENVKTH SLGPSCPPQE GERPKYAGSD QQDLVESIPP DPKGSGERNL HLKLTRNVQS SKCCEVYPEL EFLNQQNLIL
201: SMENKALKQR LENLAQEQVI KYCKFLCYLL YFTVVPVISS AWTCVIK
101: RSKSKARDVS PNAIPHPRGL SPFRENVKTH SLGPSCPPQE GERPKYAGSD QQDLVESIPP DPKGSGERNL HLKLTRNVQS SKCCEVYPEL EFLNQQNLIL
201: SMENKALKQR LENLAQEQVI KYCKFLCYLL YFTVVPVISS AWTCVIK
001: MASSKGSQSV RNLMYPGKHA LLPPKIPFPS VSASYSEYIP TGLIGSRHGQ KLSNEKTHHQ RTSSESHLVE ELPFWLDDLL NEQPESPARK CGHRRSSSDS
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF
101: YAYLDVANAT NISLTLQNDF SYRNTVLSTQ RGVQELDRNK NAQDAAFYSG ASFLKQKSRQ RDSLVATGAC PSWLPFAREN GGGKNLGALY MSQDATVISS
201: ERKNYAEPFS HDPKMLSSEE NNSNPSPVTY EADNTKRAKQ QFAQRSRVRK LQYISELERN VQTLQAEGSK VSAELDFLNQ RNLILSMENK ALKKRLESIA
301: QEKLIKQLEQ EVLEKEIGRL RALYQQQQQT QKPSASRGRA TSKDLDSQFS SLSLNTKDSN CRRDSVSVMG QFHF
Arabidopsis Description
Basic-leucine zipper (BZIP) transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I9R1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.