Factsheet for AT2G42380.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79872	Canola	nucleus, plastid	71.96	82.5
CDY35379	Canola	nucleus, plastid	68.85	82.46
CDY64520	Canola	nucleus, plastid	70.09	82.42
CDY22561	Canola	nucleus, plastid	68.54	82.09
CDX71000	Canola	nucleus, plastid	71.34	82.08
Bra004689.1-P	Field mustard	nucleus, plastid	77.57	81.37
AT3G58120.1	Thale cress	nucleus	72.59	70.82
Bra000256.1-P	Field mustard	nucleus, plastid	70.09	62.15
KRH22317	Soybean	nucleus	60.12	62.06
VIT_12s0028g02590.t01	Wine grape	nucleus, plastid	56.7	61.69
KRH27013	Soybean	nucleus	60.75	60.94
PGSC0003DMT400024289	Potato	nucleus	55.76	59.08
KRH25692	Soybean	nucleus, plastid	60.12	58.48
KRH55826	Soybean	nucleus, plastid	61.68	58.24
Solyc07g053450.2.1	Tomato	nucleus	50.16	56.69
Solyc12g010800.1.1	Tomato	nucleus	51.4	53.92
PGSC0003DMT400020206	Potato	nucleus	50.78	53.44
AT5G04840.1	Thale cress	plastid	22.43	23.45
AT1G58110.2	Thale cress	nucleus	26.48	22.73
AT1G35490.1	Thale cress	nucleus	20.56	22.0
AT4G06598.1	Thale cress	nucleus	18.07	21.89
AT1G06850.1	Thale cress	nucleus	20.87	19.88
AT1G43700.1	Thale cress	nucleus	20.56	19.35
AT2G40620.1	Thale cress	nucleus	20.87	18.26
AT2G12900.1	Thale cress	plastid	14.64	17.8
AT2G31370.6	Thale cress	nucleus	21.81	17.59
AT2G13150.1	Thale cress	plastid	14.33	17.56
AT1G06070.1	Thale cress	nucleus	22.12	16.78
AT2G12940.1	Thale cress	plastid	14.02	15.31
AT2G21230.3	Thale cress	nucleus	21.5	13.14
AT4G38900.1	Thale cress	nucleus	22.43	13.02

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:818839	ProteinID:AAD23721.1	ProteinID:AEC10113.1	ProteinID:AEC10114.1
EMBL:AF401299	ArrayExpress:AT2G42380	EnsemblPlantsGene:AT2G42380	RefSeq:AT2G42380	TAIR:AT2G42380	RefSeq:AT2G42380-TAIR-G
EnsemblPlants:AT2G42380.2	TAIR:AT2G42380.2	Symbol:ATBZIP34	EMBL:AY074657	Unigene:At.13371	ncoils:Coil
UniProt:F4IN23	GO:GO:0000977	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009555	GO:GO:0009987	GO:GO:0045893	InterPro:IPR004827	RefSeq:NP_565970.2
RefSeq:NP_850369.1	PFAM:PF07716	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0007611
PO:PO:0007616	PO:PO:0009030	PO:PO:0009046	PO:PO:0025281	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR13301	PANTHER:PTHR13301:SF134	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0000196E7D	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

BZIP34Basic leucine zipper 34 [Source:UniProtKB/Swiss-Prot;Acc:F4IN23]

Coordinates

chr2:-:17646885..17649062

Molecular Weight (calculated)

35808.1 Da

IEP (calculated)

5.829

GRAVY (calculated)

-0.816

Length

321 amino acids

Sequence
(BLAST)

001: MAQLPPKIPN MTQHWPDFSS QKLSPFSTPT ATAVATATTT VQNPSWVDEF LDFSASRRGN HRRSISDSIA FLEAPTVSIE DHQFDRFDDE QFMSMFTDDD
101: NLHSNPSHIN NKNNNVGPTG SSSNTSTPSN SFNDDNKELP PSDHNMNNNI NNNYNDEVQS QCKMEPEDGT ASNNNSGDSS GNRILDPKRV KRILANRQSA
201: QRSRVRKLQY ISELERSVTS LQAEVSVLSP RVAFLDHQRL LLNVDNSALK QRIAALSQDK LFKDAHQEAL KREIERLRQV YNQQSLTNVE NANHLSATGA
301: GATPAVDIKS SVETEQLLNV S

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.