Factsheet for Os09t0132600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

mitochondrion: 19010998
mitochondrion: 23027867

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0201000-01
Os02t0708400-01
Os08t0453800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15000.1	Os02t0708400-01	AT3G27960.1	21798944
AT3G15000.1	Os01t0201000-01	AT5G10270.1	12678503
AT3G15000.1	Os08t0453800-00	AT5G10270.1	12678503
AT3G15000.1	Os01t0201000-01	AT5G64960.1	12678503
AT3G15000.1	Os08t0453800-00	AT5G64960.1	12678503

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0509000-01	Rice	plastid	87.44	87.88
EER92767	Sorghum	mitochondrion	62.31	71.47
Zm00001d048291_P001	Maize	mitochondrion	69.35	67.32
TraesCS7B01G160200.1	Wheat	mitochondrion	68.59	65.62
TraesCS7A01G262500.1	Wheat	mitochondrion	67.34	64.42
TraesCS7D01G263300.1	Wheat	mitochondrion	68.84	63.57
HORVU7Hr1G054850.2	Barley	plastid	68.09	62.59
CDY20096	Canola	plastid	44.97	57.01
GSMUA_Achr6P08230_001	Banana	mitochondrion	57.54	56.54
Bra021584.1-P	Field mustard	plastid	47.24	56.46
CDX97626	Canola	plastid	51.51	56.32
CDX98522	Canola	plastid	52.26	56.06
CDX82454	Canola	mitochondrion, plastid	54.02	55.27
GSMUA_AchrUn_...	Banana	mitochondrion	56.03	55.2
GSMUA_Achr10P...	Banana	mitochondrion	59.8	54.34
Bra027285.1-P	Field mustard	plastid	54.27	53.73
AT3G15000.1	Thale cress	plastid	53.27	53.67
CDX75801	Canola	mitochondrion, plastid	53.77	53.63
KRH27318	Soybean	nucleus	48.49	53.17
Solyc10g007180.2.1	Tomato	plastid	51.51	52.43
Bra001578.1-P	Field mustard	plastid	48.49	52.02
PGSC0003DMT400039805	Potato	plastid	51.51	50.87
KRH21995	Soybean	plastid	51.01	50.62
VIT_19s0014g01550.t01	Wine grape	plastid	52.76	49.88
PGSC0003DMT400054809	Potato	mitochondrion	51.51	49.88
Solyc12g014230.1.1	Tomato	nucleus	52.01	48.25
Os06t0116600-01	Rice	mitochondrion	19.85	47.88
Os03t0581600-01	Rice	mitochondrion	25.63	44.74
CDY32326	Canola	cytosol	38.69	43.63
AT1G53260.1	Thale cress	cytosol	28.14	41.33
Os08t0139100-01	Rice	plastid	19.1	33.19
OQU89756	Sorghum	plastid	32.16	29.91
Os11t0216400-01	Rice	mitochondrion	21.86	23.26

Protein Annotations

MapMan:16.12.5.1	EntrezGene:4346456	EntrezGene:4347529	EMBL:AK106007	EMBL:AK109362	ProteinID:BAD22293.1
ProteinID:BAD34133.1	ProteinID:BAF24541.1	ProteinID:BAF25539.1	ProteinID:BAT06953.1	ProteinID:BAT08889.1	ProteinID:EAZ43834.1
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016554	EnsemblPlantsGene:Os09g0132600
EnsemblPlants:Os09t0132600-01	PANTHER:PTHR31346	PANTHER:PTHR31346:SF4	UniProt:Q6K456	UniParc:UPI0000377E1D	RefSeq:XP_015612225.1
RefSeq:XP_015612485.1	SEG:seg	:	:	:	:

Description

Similar to DAG protein. (Os09t0132600-01)

Coordinates

chr9:-:2489928..2493529

Molecular Weight (calculated)

43301.0 Da

IEP (calculated)

8.765

GRAVY (calculated)

-0.949

Length

398 amino acids

Sequence
(BLAST)

001: MVSASRFVLL SRLPAAAASS RFLRPLAAAG SLLPAALAPF APPAAGARCF ATQPATSSLR DSSPNWSNRP PKETILLDGC DFEHWLVVMD PPPGDPSNPE
101: PTRDEIIDGY IKTLAQIVGS EDEARHKIYS VSTRHYFAFG ALVSEELSYK LKELPKVRWV LPDSYLDVRN KDYGGEPFIN GEAVPYDPKY HEEWVRNNAR
201: ANERTRRNDR PRNFDRSRNF ERRRENMHNF QNRDVPPGQG FNSPPPPGQG PVLPRDAPPM PPPPSPPNPG APPSYQPHAP NPQAGYTNYQ GGVPGYQGRA
301: PGYQGGNQEY RGPPPPPPSA YQGNNPGYQG GGPGYHGGNP PPYQAGNPPP YQAGNPVFAG GAPGYQGQGG NPSYQQGSDN YNAGAPAYKR DEPGRNYQ

Best Arabidopsis Sequence Match ( AT3G15000.1 )
(BLAST)

001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

Arabidopsis Description

MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.