Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400039805 | Potato | plastid | 88.58 | 94.29 |
| Solyc10g007180.2.1 | Tomato | plastid | 68.3 | 74.94 |
| CDX97626 | Canola | plastid | 51.75 | 60.99 |
| CDX98522 | Canola | plastid | 52.21 | 60.38 |
| CDX75801 | Canola | mitochondrion, plastid | 54.31 | 58.4 |
| CDX82454 | Canola | mitochondrion, plastid | 52.91 | 58.35 |
| CDY20096 | Canola | plastid | 42.66 | 58.28 |
| KRH27318 | Soybean | nucleus | 48.72 | 57.58 |
| Bra027285.1-P | Field mustard | plastid | 53.85 | 57.46 |
| VIT_19s0014g01550.t01 | Wine grape | plastid | 56.18 | 57.24 |
| Bra021584.1-P | Field mustard | plastid | 44.29 | 57.06 |
| Bra001578.1-P | Field mustard | plastid | 48.48 | 56.06 |
| KRH21995 | Soybean | plastid | 50.58 | 54.11 |
| EER92766 | Sorghum | mitochondrion | 48.72 | 53.87 |
| Os09t0509000-01 | Rice | plastid | 48.48 | 52.53 |
| TraesCS5B01G290000.1 | Wheat | mitochondrion, plastid | 41.26 | 52.52 |
| TraesCS5B01G289900.1 | Wheat | nucleus | 49.18 | 52.36 |
| TraesCS5D01G298300.2 | Wheat | mitochondrion | 48.95 | 52.24 |
| EER92767 | Sorghum | mitochondrion | 42.19 | 52.16 |
| Os09t0132600-01 | Rice | mitochondrion | 48.25 | 52.01 |
| TraesCS5A01G291000.1 | Wheat | mitochondrion | 47.79 | 51.51 |
| HORVU5Hr1G077020.3 | Barley | mitochondrion | 48.72 | 51.35 |
| Zm00001d048291_P001 | Maize | mitochondrion | 47.09 | 49.27 |
| GSMUA_Achr6P08230_001 | Banana | mitochondrion | 45.22 | 47.9 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 44.99 | 47.77 |
| TraesCS7B01G160200.1 | Wheat | mitochondrion | 46.15 | 47.6 |
| TraesCS7A01G262500.1 | Wheat | mitochondrion | 45.92 | 47.36 |
| TraesCS7D01G263300.1 | Wheat | mitochondrion | 46.39 | 46.17 |
| CDY32326 | Canola | cytosol | 37.76 | 45.89 |
| HORVU7Hr1G054850.2 | Barley | plastid | 45.92 | 45.5 |
| Solyc01g066060.2.1 | Tomato | plastid | 27.27 | 45.17 |
| GSMUA_Achr10P... | Banana | mitochondrion | 45.92 | 44.98 |
| AT1G53260.1 | Thale cress | cytosol | 27.27 | 43.17 |
| Solyc06g008220.2.1 | Tomato | plastid | 20.28 | 36.4 |
| Solyc02g079770.2.1 | Tomato | plastid | 18.18 | 34.51 |
| Solyc05g054960.2.1 | Tomato | plastid | 18.65 | 34.19 |
| OQU89756 | Sorghum | plastid | 30.77 | 30.84 |
| Solyc02g079210.2.1 | Tomato | plastid | 24.24 | 22.61 |
Protein Annotations
| EnsemblPlants:Solyc12g014230.1.1 | EnsemblPlantsGene:Solyc12g014230.1 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF4 | SEG:seg | UniParc:UPI000276A659 | UniProt:K4DCV8 |
| MapMan:16.12.5.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr12:-:5063272..5065299
Molecular Weight (calculated)
47274.2 Da
IEP (calculated)
9.396
GRAVY (calculated)
-1.093
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRSLLNAF KRSCNSFSLS TTPSTYSLHL LRPLHAVAAN LRNVSPAPTP FSRGFATRQT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW LVVMEKPEGD
101: PTRDEIIDSY IKTLATIVGS EEEARMKIYS VSTRHYFAFG ALVSEELSYK LKELPKVRWV LPDSYLDVRN KDYGGEPFIN GQAVPYDPKY HEEWVRNNAR
201: ANERNRRNDR PRNFDRSRNF ERRREMQNQP SQNPGSNMAA GGPPNMGGMQ QPNMGGMHQQ QGMGGPPPHA GGMHQQQGYG GPPPHAGGMQ QPDMRGPPMQ
301: QQGYGGPPPH AGGMQQPDMR GPPMQQQGYG GPPPHAGGMQ QPDMRGPPRG GGMQQPNMPP NMGGVPPNNY GMPNNARNFQ YNGGGQNNGD TPYQTGPGPN
401: QSYAPNTSDG NSYQNPNMAG RDMSNSNYR
101: PTRDEIIDSY IKTLATIVGS EEEARMKIYS VSTRHYFAFG ALVSEELSYK LKELPKVRWV LPDSYLDVRN KDYGGEPFIN GQAVPYDPKY HEEWVRNNAR
201: ANERNRRNDR PRNFDRSRNF ERRREMQNQP SQNPGSNMAA GGPPNMGGMQ QPNMGGMHQQ QGMGGPPPHA GGMHQQQGYG GPPPHAGGMQ QPDMRGPPMQ
301: QQGYGGPPPH AGGMQQPDMR GPPMQQQGYG GPPPHAGGMQ QPDMRGPPRG GGMQQPNMPP NMGGVPPNNY GMPNNARNFQ YNGGGQNNGD TPYQTGPGPN
401: QSYAPNTSDG NSYQNPNMAG RDMSNSNYR
001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
Arabidopsis Description
MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.