Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6A01G274500.1 | |
| TraesCS6B01G302000.1 | |
| TraesCS6D01G254800.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15000.1 | TraesCS6A01G274500.1 | AT3G27960.1 | 21798944 |
| AT3G15000.1 | TraesCS6B01G302000.1 | AT3G27960.1 | 21798944 |
| AT3G15000.1 | TraesCS6D01G254800.1 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G160200.1 | Wheat | mitochondrion | 94.66 | 98.08 |
| TraesCS7A01G262500.1 | Wheat | mitochondrion | 93.5 | 96.88 |
| HORVU7Hr1G054850.2 | Barley | plastid | 92.58 | 92.15 |
| EER92766 | Sorghum | mitochondrion | 67.98 | 75.52 |
| Os09t0509000-01 | Rice | plastid | 63.81 | 69.44 |
| Os09t0132600-01 | Rice | mitochondrion | 63.57 | 68.84 |
| Zm00001d048291_P001 | Maize | mitochondrion | 64.97 | 68.29 |
| TraesCS5D01G298300.2 | Wheat | mitochondrion | 61.95 | 66.42 |
| GSMUA_Achr6P08230_001 | Banana | mitochondrion | 51.74 | 55.06 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 51.28 | 54.7 |
| CDX97626 | Canola | plastid | 45.94 | 54.4 |
| CDY20096 | Canola | plastid | 39.44 | 54.14 |
| Bra021584.1-P | Field mustard | plastid | 41.76 | 54.05 |
| CDX98522 | Canola | plastid | 46.4 | 53.91 |
| GSMUA_Achr10P... | Banana | mitochondrion | 54.06 | 53.2 |
| CDX82454 | Canola | mitochondrion, plastid | 46.87 | 51.93 |
| Bra027285.1-P | Field mustard | plastid | 47.56 | 50.99 |
| KRH27318 | Soybean | nucleus | 42.92 | 50.96 |
| CDX75801 | Canola | mitochondrion, plastid | 46.87 | 50.63 |
| AT3G15000.1 | Thale cress | plastid | 45.71 | 49.87 |
| KRH21995 | Soybean | plastid | 46.17 | 49.63 |
| Solyc10g007180.2.1 | Tomato | plastid | 45.01 | 49.62 |
| PGSC0003DMT400039805 | Potato | plastid | 45.71 | 48.88 |
| Bra001578.1-P | Field mustard | plastid | 42.0 | 48.79 |
| PGSC0003DMT400054809 | Potato | mitochondrion | 45.24 | 47.45 |
| VIT_19s0014g01550.t01 | Wine grape | plastid | 46.17 | 47.27 |
| Solyc12g014230.1.1 | Tomato | nucleus | 46.17 | 46.39 |
| TraesCS6D01G294000.1 | Wheat | mitochondrion | 26.45 | 45.24 |
| CDY32326 | Canola | cytosol | 33.87 | 41.36 |
| AT1G53260.1 | Thale cress | cytosol | 24.59 | 39.11 |
| TraesCS2D01G434600.1 | Wheat | plastid | 19.49 | 39.07 |
| TraesCS7D01G045100.1 | Wheat | mitochondrion, plastid | 19.95 | 37.07 |
| TraesCS7D01G303900.1 | Wheat | plastid | 18.56 | 35.09 |
| TraesCS6D01G007100.1 | Wheat | mitochondrion | 18.79 | 33.61 |
| TraesCS4D01G104800.2 | Wheat | mitochondrion | 21.35 | 22.12 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G263300.1 | EnsemblPlantsGene:TraesCS7D01G263300 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF4 | SEG:seg | MapMan:16.12.5.1 |
Description
No Description!
Coordinates
chr7D:-:243332291..243336026
Molecular Weight (calculated)
46059.6 Da
IEP (calculated)
9.305
GRAVY (calculated)
-0.854
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMASRAVLL SRLSPLPAAA SRLLLRPLAA AASLLPAATS PVPAAARGAV RCFATQPATS SLRDSSPNWS NRPPKETILL DGCDFEHWLV VMEPPAGDAA
101: NPDVTRDEII DSYIKTLAQV VGSEQEARQK IYSVSTRHYF AFGALVSEEL SYKLKELPKV RWVLPDSYLD VRNKDYGGEP FIGGEAVPYD PKYHEEWVRN
201: NARANERSRR SDRPRNFDRS RNFERRRENM QNFQNRDAPP GQQGFNGPPP GQNPGSMPPP PPPSQNRGNM PPPYTPGGPS NYQPQMQNPQ AAYTPGGAPQ
301: MPNPETGYAP GGAPRMPNPQ TGYAPGGAPQ MPNPQTGYTP GRAPHMLNQQ AGYVPGGASN YQQGGQAGYQ GGPAGHQGGN QVYPGGNLPG GPGPAHPGSS
401: PGYQGANAPP REGYGYPGGY NSSAPGGYNQ Q
101: NPDVTRDEII DSYIKTLAQV VGSEQEARQK IYSVSTRHYF AFGALVSEEL SYKLKELPKV RWVLPDSYLD VRNKDYGGEP FIGGEAVPYD PKYHEEWVRN
201: NARANERSRR SDRPRNFDRS RNFERRRENM QNFQNRDAPP GQQGFNGPPP GQNPGSMPPP PPPSQNRGNM PPPYTPGGPS NYQPQMQNPQ AAYTPGGAPQ
301: MPNPETGYAP GGAPRMPNPQ TGYAPGGAPQ MPNPQTGYTP GRAPHMLNQQ AGYVPGGASN YQQGGQAGYQ GGPAGHQGGN QVYPGGNLPG GPGPAHPGSS
401: PGYQGANAPP REGYGYPGGY NSSAPGGYNQ Q
001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG
Arabidopsis Description
MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.