Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 3
- extracellular 3
- cytosol 2
- vacuole 2
- plasma membrane 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G15000.1 | Thale cress | plastid | 53.87 | 36.96 |
| VIT_19s0014g01550.t01 | Wine grape | plastid | 51.29 | 33.02 |
| KRH21995 | Soybean | plastid | 46.13 | 31.17 |
| KRH27318 | Soybean | nucleus | 41.7 | 31.13 |
| TraesCS5B01G290000.1 | Wheat | mitochondrion, plastid | 36.53 | 29.38 |
| Os09t0509000-01 | Rice | plastid | 42.44 | 29.04 |
| Solyc10g007180.2.1 | Tomato | plastid | 41.7 | 28.9 |
| EER92766 | Sorghum | mitochondrion | 41.33 | 28.87 |
| PGSC0003DMT400039805 | Potato | plastid | 42.8 | 28.78 |
| TraesCS5B01G289900.1 | Wheat | nucleus | 42.07 | 28.29 |
| Os09t0132600-01 | Rice | mitochondrion | 41.33 | 28.14 |
| PGSC0003DMT400054809 | Potato | mitochondrion | 42.44 | 27.98 |
| TraesCS5D01G298300.2 | Wheat | mitochondrion | 41.33 | 27.86 |
| HORVU5Hr1G077020.3 | Barley | mitochondrion | 41.7 | 27.76 |
| TraesCS5A01G291000.1 | Wheat | mitochondrion | 40.22 | 27.39 |
| Solyc12g014230.1.1 | Tomato | nucleus | 43.17 | 27.27 |
| Zm00001d048291_P001 | Maize | mitochondrion | 39.85 | 26.34 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 39.11 | 26.24 |
| EER92767 | Sorghum | mitochondrion | 33.58 | 26.22 |
| TraesCS7A01G262500.1 | Wheat | mitochondrion | 39.48 | 25.72 |
| TraesCS7B01G160200.1 | Wheat | mitochondrion | 39.11 | 25.48 |
| GSMUA_Achr6P08230_001 | Banana | mitochondrion | 38.01 | 25.43 |
| TraesCS7D01G263300.1 | Wheat | mitochondrion | 39.11 | 24.59 |
| HORVU7Hr1G054850.2 | Barley | plastid | 39.11 | 24.48 |
| GSMUA_Achr10P... | Banana | mitochondrion | 39.48 | 24.43 |
| AT3G06790.2 | Thale cress | mitochondrion | 19.56 | 21.72 |
| AT1G72530.2 | Thale cress | mitochondrion | 15.13 | 21.35 |
| AT2G35240.1 | Thale cress | mitochondrion, plastid | 13.65 | 15.95 |
| AT1G11430.1 | Thale cress | plastid | 13.65 | 15.95 |
| AT1G32580.1 | Thale cress | mitochondrion, plastid | 13.28 | 15.72 |
| OQU89756 | Sorghum | plastid | 24.35 | 15.42 |
| AT4G20020.1 | Thale cress | mitochondrion | 19.56 | 12.65 |
| AT5G44780.1 | Thale cress | mitochondrion | 22.14 | 8.3 |
Protein Annotations
| ArrayExpress:AT1G53260 | EMBL:AY954765 | EnsemblPlants:AT1G53260.1 | EnsemblPlantsGene:AT1G53260 | EntrezGene:841759 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016554 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF4 |
| ProteinID:AEE32912.1 | RefSeq:AT1G53260 | RefSeq:AT1G53260-TAIR-G | RefSeq:NP_175733.2 | SEG:seg | TAIR:AT1G53260 |
| TAIR:AT1G53260.1 | Unigene:At.50949 | UniParc:UPI00004ED987 | UniProt:Q58G44 | MapMan:35.1 | : |
Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q58G44]
Coordinates
chr1:-:19859267..19860976
Molecular Weight (calculated)
30115.8 Da
IEP (calculated)
9.625
GRAVY (calculated)
-1.516
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIYSVSHKC YFAFGALVSE DLSHKIKELP KVKWVLPDSY LDGKNKDYGG EPFIDGKAVP YDPKYHEEWI RNNANATNEN RRPRRPRNSD GGRNDRGNQD
101: TGYRRPPPNQ GMGGAPPPPP HIGNNPNMPP HIQPPNMNQN YRGPPPPPNM NQNYQGPPAP NMNQNYQGPP PSNMGQNYQG PPPPNMNQSY QGPPPPNMNQ
201: SYQGPPPSNM GQNYRGPSLP PPNMSQNYEG PPPPNMNGGW SGNYQQNGGY QQQGQGGGMQ QQPYPPNRNQ S
101: TGYRRPPPNQ GMGGAPPPPP HIGNNPNMPP HIQPPNMNQN YRGPPPPPNM NQNYQGPPAP NMNQNYQGPP PSNMGQNYQG PPPPNMNQSY QGPPPPNMNQ
201: SYQGPPPSNM GQNYRGPSLP PPNMSQNYEG PPPPNMNGGW SGNYQQNGGY QQQGQGGGMQ QQPYPPNRNQ S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.