Factsheet for VIT_19s0014g01550.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98522	Canola	plastid	62.71	71.16
CDX97626	Canola	plastid	61.05	70.6
Bra027285.1-P	Field mustard	plastid	64.85	67.91
CDX75801	Canola	mitochondrion, plastid	64.13	67.67
CDX82454	Canola	mitochondrion, plastid	62.47	67.61
Bra001578.1-P	Field mustard	plastid	57.48	65.23
CDY20096	Canola	plastid	48.22	64.65
Bra021584.1-P	Field mustard	plastid	51.07	64.56
KRH27318	Soybean	nucleus	52.73	61.16
Solyc10g007180.2.1	Tomato	plastid	55.34	59.59
KRH21995	Soybean	plastid	56.29	59.1
PGSC0003DMT400039805	Potato	plastid	56.06	58.56
PGSC0003DMT400054809	Potato	mitochondrion	56.53	57.91
Solyc12g014230.1.1	Tomato	nucleus	57.24	56.18
EER92766	Sorghum	mitochondrion	51.31	55.67
CDY32326	Canola	cytosol	45.84	54.67
Os09t0509000-01	Rice	plastid	51.07	54.29
EER92767	Sorghum	mitochondrion	43.94	53.31
TraesCS5B01G289900.1	Wheat	nucleus	50.59	52.85
Os09t0132600-01	Rice	mitochondrion	49.88	52.76
TraesCS5A01G291000.1	Wheat	mitochondrion	49.64	52.51
TraesCS5D01G298300.2	Wheat	mitochondrion	50.12	52.49
HORVU5Hr1G077020.3	Barley	mitochondrion	50.36	52.09
TraesCS5B01G290000.1	Wheat	mitochondrion, plastid	41.33	51.63
AT1G53260.1	Thale cress	cytosol	33.02	51.29
Zm00001d048291_P001	Maize	mitochondrion	48.69	50.0
GSMUA_Achr6P08230_001	Banana	mitochondrion	47.74	49.63
GSMUA_AchrUn_...	Banana	mitochondrion	46.56	48.51
VIT_05s0077g01880.t01	Wine grape	mitochondrion	29.93	48.46
GSMUA_Achr10P...	Banana	mitochondrion	49.88	47.95
TraesCS7B01G160200.1	Wheat	mitochondrion	47.27	47.84
TraesCS7A01G262500.1	Wheat	mitochondrion	46.56	47.12
TraesCS7D01G263300.1	Wheat	mitochondrion	47.27	46.17
HORVU7Hr1G054850.2	Barley	plastid	47.03	45.73
VIT_09s0002g01100.t01	Wine grape	mitochondrion	21.62	42.92
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	22.33	39.83
VIT_05s0049g01500.t01	Wine grape	plastid	21.38	38.63
VIT_19s0014g04710.t01	Wine grape	plastid	17.58	32.31
OQU89756	Sorghum	plastid	30.64	30.14
VIT_12s0035g00240.t01	Wine grape	mitochondrion	22.8	23.82

Protein Annotations

EntrezGene:100265808	wikigene:100265808	MapMan:16.12.5.1	ProteinID:CCB46268	ProteinID:CCB46268.1	UniProt:F6H1X2
EMBL:FN595229	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016554	GO:GO:0050897	GO:GO:0080156
EntrezGene:LOC100265808	wikigene:LOC100265808	PFscan:PS51257	PANTHER:PTHR31346	PANTHER:PTHR31346:SF4	TIGR:TC56721
UniParc:UPI00015C7490	ArrayExpress:VIT_19s0014g01550	EnsemblPlantsGene:VIT_19s0014g01550	EnsemblPlants:VIT_19s0014g01550.t01	unigene:Vvi.12366	RefSeq:XP_002285388
RefSeq:XP_002285388.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr19:+:1640956..1644572

Molecular Weight (calculated)

44773.9 Da

IEP (calculated)

9.331

GRAVY (calculated)

-0.849

Length

421 amino acids

Sequence
(BLAST)

001: MATLTRCLAR SLPAFSSLIS RSTPSLSLST ASCSTFSLLR LRPLSAAAVS VLRHLPQSTS ARSFSTRQTS SSLNDPNPNW SNRPPKETIL LDGCDFEHWL
101: VVMEKPEGDP TRDEIIDSYI KTLAMIVGSE EEARMKIYSV STRCYFAFGA LVSEELSLKI KELPRVRWVL PDSYLDVKNK DYGGEPFIDG KAVPYDPKYH
201: EEWIRNNARA NERNRRNDRP RNFDRSRNFE RRRENMQNRD FQAPMQNSPP NMGGGPPPNM GGGPPPNMGG GPPPNMGMGG GPPSNNFGGP QNNFRGGPPN
301: NYGGAPPSNY GGGAPPSNYG GGTPPGNYGG GAPPSNYGGG APPSNIGGGA PPSNYGGGAP PSNYGGGAPP SNYGGGAPPN NYGGGMPQSN FGGGMPPNNA
401: GGNASQQQWW NADQQPGRNS Q

Best Arabidopsis Sequence Match ( AT3G15000.1 )
(BLAST)

001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

Arabidopsis Description

MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.