Factsheet for VIT_05s0049g01500.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_03s0038g00350.t01
VIT_05s0020g04020.t01
VIT_07s0031g02330.t01
VIT_07s0130g00490.t01
VIT_13s0019g00340.t01
VIT_16s0098g00600.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	VIT_07s0031g02330.t01	AT3G48150.1	21798944
AT1G32580.1	VIT_07s0130g00490.t01	AT3G48150.1	21798944
AT1G32580.1	VIT_16s0098g00600.t01	AT3G49580.1	21798944
AT2G35240.1	VIT_16s0098g00600.t01	AT3G49580.1	21798944
AT2G35240.1	VIT_05s0020g04020.t01	AT4G14740.1	21798944
AT2G35240.1	VIT_03s0038g00350.t01	AT4G39050.1	21798944
AT2G35240.1	VIT_13s0019g00340.t01	AT5G13810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0116600-01	Rice	mitochondrion	63.52	89.7
GSMUA_Achr6P01260_001	Banana	cytosol	54.94	87.07
GSMUA_Achr4P27580_001	Banana	cytosol	54.94	87.07
HORVU0Hr1G032330.2	Barley	cytosol	40.34	86.24
CDY58181	Canola	cytosol	56.65	78.57
Bra017328.1-P	Field mustard	cytosol	62.66	78.49
TraesCS2D01G434600.1	Wheat	plastid	67.81	73.49
TraesCS2B01G457700.1	Wheat	plastid	67.38	73.36
EES11377	Sorghum	mitochondrion, plastid	67.81	73.15
TraesCS2A01G437600.1	Wheat	plastid	66.95	72.9
Zm00001d026243_P002	Maize	extracellular	67.81	72.81
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	72.96	72.03
Zm00001d045528_P001	Maize	mitochondrion	68.24	71.3
AT1G32580.1	Thale cress	mitochondrion, plastid	69.1	70.31
TraesCS4A01G437100.1	Wheat	mitochondrion	70.82	70.21
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	69.53	69.83
EER87743	Sorghum	mitochondrion	66.52	69.82
HORVU7Hr1G008880.2	Barley	plastid	70.39	68.33
TraesCS7A01G050200.1	Wheat	mitochondrion	69.1	68.22
CDX84224	Canola	mitochondrion, plastid	66.95	67.83
AT2G35240.1	Thale cress	mitochondrion, plastid	67.38	67.67
Bra005357.1-P	Field mustard	plastid	67.81	67.52
Bra036402.1-P	Field mustard	mitochondrion, plastid	64.38	67.26
CDY31675	Canola	plastid	67.38	67.09
CDY65831	Canola	mitochondrion, plastid	63.09	65.92
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	71.24	64.09
TraesCS6D01G007100.1	Wheat	mitochondrion	65.67	63.49
Bra017613.1-P	Field mustard	plastid	18.45	63.24
HORVU5Hr1G072150.9	Barley	mitochondrion	45.49	61.63
TraesCS6A01G005300.1	Wheat	plastid	65.67	61.2
HORVU6Hr1G002030.1	Barley	plastid	67.38	61.09
TraesCS6B01G010000.1	Wheat	plastid	65.67	60.96
HORVU1Hr1G057120.1	Barley	plastid	35.62	54.25
CDX79597	Canola	plastid	53.65	53.65
Bra023005.1-P	Field mustard	endoplasmic reticulum	21.03	52.69
TraesCS3A01G476100.2	Wheat	plastid	35.62	46.63
CDX84615	Canola	mitochondrion	33.91	44.13
HORVU2Hr1G040170.17	Barley	mitochondrion	45.06	38.46
VIT_05s0077g01880.t01	Wine grape	mitochondrion	39.06	35.0
VIT_19s0014g04710.t01	Wine grape	plastid	30.04	30.57
VIT_09s0002g01100.t01	Wine grape	mitochondrion	27.04	29.72
VIT_19s0014g01550.t01	Wine grape	plastid	38.63	21.38
VIT_12s0035g00240.t01	Wine grape	mitochondrion	31.33	18.11

Protein Annotations

EntrezGene:100251024	wikigene:100251024	MapMan:16.12.5.1	UniProt:A5BJL9	EMBL:AM461723	ProteinID:CAN67991
ProteinID:CAN67991.1	ProteinID:CCB48606	ProteinID:CCB48606.1	EMBL:FN595496	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016554	EntrezGene:LOC100251024	wikigene:LOC100251024	PANTHER:PTHR31346
PANTHER:PTHR31346:SF9	TIGR:TC54480	UniParc:UPI0001521088	ArrayExpress:VIT_05s0049g01500	EnsemblPlantsGene:VIT_05s0049g01500	EnsemblPlants:VIT_05s0049g01500.t01
unigene:Vvi.1296	RefSeq:XP_002285392	RefSeq:XP_002285392.1	:	:	:

Description

No Description!

Coordinates

chr5:+:8866548..8872222

Molecular Weight (calculated)

26278.2 Da

IEP (calculated)

9.129

GRAVY (calculated)

-0.615

Length

233 amino acids

Sequence
(BLAST)

001: MAAAVAPAIN TTMSPLVLSK RFVSSTSHPR LLLTRRPSVQ FSRALRVVSP GSAGSSRFTP VRCRVNRSGD SYSPLNSGSN FSDRPPTEMA PLFPGCDYEH
101: WLIVMDKPGG EGATKQQMID CYIQTLAKVV GSEEEAKKKI YNVSCERYFG FGCEIDEETS NKLEGLPGVL FVLPDSYVDP EYKDYGAELF VNGEIVQRSP
201: ERQRRVEPAP QRAQDRPRYN DKTRYVRRRE NMR

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.