Factsheet for TraesCS4A01G437100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS5A01G056700.2
TraesCS5A01G377600.1
TraesCS5B01G060100.2
TraesCS5B01G381200.1
TraesCS5D01G067900.2
TraesCS5D01G387600.1
TraesCS6A01G251400.1
TraesCS6B01G273900.1
TraesCS6D01G233200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	TraesCS6A01G251400.1	AT3G48150.1	21798944
AT1G32580.1	TraesCS6B01G273900.1	AT3G48150.1	21798944
AT1G32580.1	TraesCS6D01G233200.1	AT3G48150.1	21798944
AT2G35240.1	TraesCS5A01G056700.2	AT4G14740.1	21798944
AT2G35240.1	TraesCS5A01G377600.1	AT4G14740.1	21798944
AT2G35240.1	TraesCS5B01G060100.2	AT4G14740.1	21798944
AT2G35240.1	TraesCS5B01G381200.1	AT4G14740.1	21798944
AT2G35240.1	TraesCS5D01G067900.2	AT4G14740.1	21798944
AT2G35240.1	TraesCS5D01G387600.1	AT4G14740.1	21798944
AT2G35240.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT2G35240.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT2G35240.1	TraesCS1D01G176100.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	96.17	97.41
TraesCS7A01G050200.1	Wheat	mitochondrion	97.02	96.61
HORVU7Hr1G008880.2	Barley	plastid	96.6	94.58
Os06t0116600-01	Rice	mitochondrion	66.38	94.55
GSMUA_Achr6P01260_001	Banana	cytosol	54.04	86.39
Zm00001d045528_P001	Maize	mitochondrion	81.28	85.65
EER87743	Sorghum	mitochondrion	80.85	85.59
GSMUA_Achr4P27580_001	Banana	cytosol	53.19	85.03
CDX79529	Canola	cytosol	42.55	82.64
TraesCS2A01G437600.1	Wheat	plastid	71.49	78.5
TraesCS6A01G005300.1	Wheat	plastid	82.13	77.2
CDY58181	Canola	cytosol	52.34	73.21
Bra017328.1-P	Field mustard	cytosol	57.02	72.04
VIT_05s0049g01500.t01	Wine grape	plastid	70.21	70.82
PGSC0003DMT400038117	Potato	plastid	68.09	69.26
CDY37719	Canola	plastid	64.68	68.47
Bra005495.1-P	Field mustard	plastid	66.81	68.26
Bra021852.1-P	Field mustard	plastid	64.26	68.02
CDY17174	Canola	plastid	66.38	67.83
CDY23734	Canola	plastid	65.53	67.54
CDY19491	Canola	plastid	66.38	67.53
Solyc06g008220.2.1	Tomato	plastid	68.51	67.36
KRG92352	Soybean	mitochondrion, plastid	67.66	67.09
KRH31686	Soybean	mitochondrion	63.4	66.82
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	66.38	66.1
AT1G32580.1	Thale cress	mitochondrion, plastid	62.98	64.63
CDY31675	Canola	plastid	64.26	64.53
Bra005357.1-P	Field mustard	plastid	64.26	64.53
CDX84224	Canola	mitochondrion, plastid	62.98	64.35
PGSC0003DMT400060429	Potato	plastid	63.83	64.1
Solyc05g054960.2.1	Tomato	plastid	63.4	63.68
Bra017613.1-P	Field mustard	plastid	18.3	63.24
Bra036402.1-P	Field mustard	mitochondrion, plastid	59.15	62.33
AT2G35240.1	Thale cress	mitochondrion, plastid	61.28	62.07
CDY65831	Canola	mitochondrion, plastid	58.72	61.88
KRH34443	Soybean	plastid	68.51	60.98
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	66.38	60.23
TraesCS3A01G476100.2	Wheat	plastid	40.0	52.81
CDX79597	Canola	plastid	50.64	51.07
Bra023005.1-P	Field mustard	endoplasmic reticulum	19.57	49.46
CDX84615	Canola	mitochondrion	32.77	43.02
TraesCS7A01G307000.1	Wheat	plastid	33.19	34.36
TraesCS6A01G314700.1	Wheat	mitochondrion	36.17	33.73
TraesCS5A01G291000.1	Wheat	mitochondrion	36.17	21.36
TraesCS7A01G262500.1	Wheat	mitochondrion	36.17	20.43
TraesCS4A01G203900.1	Wheat	nucleus	33.19	18.84

Protein Annotations

EnsemblPlants:TraesCS4A01G437100.1

EnsemblPlantsGene:TraesCS4A01G437100

PANTHER:PTHR31346

PANTHER:PTHR31346:SF9

SEG:seg

MapMan:16.12.5.1

Description

No Description!

Coordinates

chr4A:+:707036686..707039415

Molecular Weight (calculated)

25628.4 Da

IEP (calculated)

9.350

GRAVY (calculated)

-0.586

Length

235 amino acids

Sequence
(BLAST)

001: MAAAAAAAGA RRLVARRASS SPVSISALLR RGGAAVATPH EPLLRPAALA GVASRLGFVR GMARRPGGDG YSPARSGGGG GGGDRAPTEM APLFPGCDYE
101: HWLIVMDKPG GEGATKHQMI DCYIQTLAKV LGSEEEAKKK IYNVSCERYF GFGCEIDEET SNKLEGIPGV LFVLPDSYVD PEHKDYGAEL FVNGEIVQRS
201: PERQRRVEPV PQRASDRPRY NDRTRYQRRR ENQQR

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.