Factsheet for TraesCS2A01G437600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G177600.1
TraesCS1B01G202600.1
TraesCS1D01G176100.1
TraesCS5A01G056700.2
TraesCS5A01G377600.1
TraesCS5B01G060100.2
TraesCS5B01G381200.1
TraesCS5D01G067900.2
TraesCS5D01G387600.1
TraesCS6A01G251400.1
TraesCS6B01G273900.1
TraesCS6D01G233200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	TraesCS6A01G251400.1	AT3G48150.1	21798944
AT1G32580.1	TraesCS6B01G273900.1	AT3G48150.1	21798944
AT1G32580.1	TraesCS6D01G233200.1	AT3G48150.1	21798944
AT2G35240.1	TraesCS5A01G056700.2	AT4G14740.1	21798944
AT2G35240.1	TraesCS5A01G377600.1	AT4G14740.1	21798944
AT2G35240.1	TraesCS5B01G060100.2	AT4G14740.1	21798944
AT2G35240.1	TraesCS5B01G381200.1	AT4G14740.1	21798944
AT2G35240.1	TraesCS5D01G067900.2	AT4G14740.1	21798944
AT2G35240.1	TraesCS5D01G387600.1	AT4G14740.1	21798944
AT2G35240.1	TraesCS1A01G177600.1	AT4G39050.1	21798944
AT2G35240.1	TraesCS1B01G202600.1	AT4G39050.1	21798944
AT2G35240.1	TraesCS1D01G176100.1	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G434600.1	Wheat	plastid	97.2	96.74
TraesCS2B01G457700.1	Wheat	plastid	96.26	96.26
EES11377	Sorghum	mitochondrion, plastid	90.65	89.81
Zm00001d026243_P002	Maize	extracellular	88.32	87.1
GSMUA_Achr6P01260_001	Banana	cytosol	59.35	86.39
GSMUA_Achr4P27580_001	Banana	cytosol	59.35	86.39
CDX79529	Canola	cytosol	47.66	84.3
TraesCS4A01G437100.1	Wheat	mitochondrion	78.5	71.49
CDY58181	Canola	cytosol	55.61	70.83
TraesCS7A01G050200.1	Wheat	mitochondrion	77.57	70.34
Bra017328.1-P	Field mustard	cytosol	59.81	68.82
Bra021852.1-P	Field mustard	plastid	70.56	68.02
CDY37719	Canola	plastid	70.56	68.02
PGSC0003DMT400038117	Potato	plastid	73.36	67.97
Solyc06g008220.2.1	Tomato	plastid	75.23	67.36
VIT_05s0049g01500.t01	Wine grape	plastid	72.9	66.95
CDY23734	Canola	plastid	71.03	66.67
CDY19491	Canola	plastid	71.03	65.8
CDY17174	Canola	plastid	70.56	65.65
Bra005495.1-P	Field mustard	plastid	70.56	65.65
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	71.5	64.83
TraesCS6A01G005300.1	Wheat	plastid	75.7	64.8
KRH31686	Soybean	mitochondrion	67.29	64.57
KRG92352	Soybean	mitochondrion, plastid	70.09	63.29
AT1G32580.1	Thale cress	mitochondrion, plastid	65.89	61.57
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	74.3	61.39
PGSC0003DMT400060429	Potato	plastid	65.89	60.26
CDX84224	Canola	mitochondrion, plastid	64.49	60.0
CDY31675	Canola	plastid	64.49	58.97
Solyc05g054960.2.1	Tomato	plastid	64.49	58.97
Bra005357.1-P	Field mustard	plastid	64.49	58.97
AT2G35240.1	Thale cress	mitochondrion, plastid	63.55	58.62
Bra036402.1-P	Field mustard	mitochondrion, plastid	60.28	57.85
KRH34443	Soybean	plastid	71.03	57.58
CDY65831	Canola	mitochondrion, plastid	59.35	56.95
Bra017613.1-P	Field mustard	plastid	17.76	55.88
HORVU1Hr1G057120.1	Barley	plastid	39.72	55.56
Bra023005.1-P	Field mustard	endoplasmic reticulum	21.03	48.39
TraesCS3A01G476100.2	Wheat	plastid	39.72	47.75
CDX79597	Canola	plastid	50.0	45.92
CDX84615	Canola	mitochondrion	30.84	36.87
TraesCS6A01G314700.1	Wheat	mitochondrion	38.78	32.94
TraesCS7A01G307000.1	Wheat	plastid	33.18	31.28
TraesCS5A01G291000.1	Wheat	mitochondrion	37.85	20.35
TraesCS7A01G262500.1	Wheat	mitochondrion	37.85	19.47
TraesCS4A01G203900.1	Wheat	nucleus	33.18	17.15

Protein Annotations

EnsemblPlants:TraesCS2A01G437600.1

EnsemblPlantsGene:TraesCS2A01G437600

PANTHER:PTHR31346

PANTHER:PTHR31346:SF9

SEG:seg

MapMan:16.12.5.1

Description

No Description!

Coordinates

chr2A:+:689201630..689203658

Molecular Weight (calculated)

24182.8 Da

IEP (calculated)

9.367

GRAVY (calculated)

-0.767

Length

214 amino acids

Sequence
(BLAST)

001: MATAARAVAA AARPARPVLQ PRRLPCPSAR PARPRVGRAV RCMARRPDAS YSPLRPGQGG DRAPTEMAPL FPGCDYEHWL IVMDKPGGEG ATKHQMIDCY
101: IQTLAKVVGS EEESKKRIYN VSCERYFGFG CEIDEETSNK LEGLPGVLFV LPDSYVDAEN KDYGAELFVN GEIVQRSPER QRRVEPVPQR AQDRPRYSDR
201: TRYVKRRENQ AYQR

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.