Factsheet for TraesCS7A01G307000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G207300.1	Wheat	plastid	97.8	97.37
TraesCS7D01G303900.1	Wheat	plastid	96.04	95.61
HORVU7Hr1G073170.2	Barley	plastid	97.8	87.75
GSMUA_Achr8P33150_001	Banana	cytosol	52.86	86.33
CDX97960	Canola	cytosol	58.15	85.71
CDY20996	Canola	cytosol	57.27	84.97
Zm00001d024674_P001	Maize	plastid	79.3	80.72
EES14516	Sorghum	plastid	79.3	80.0
Os08t0139100-01	Rice	plastid	80.18	79.48
CDY37239	Canola	cytosol	41.41	71.76
VIT_19s0014g04710.t01	Wine grape	plastid	68.72	68.12
KRH10700	Soybean	nucleus, plastid	65.64	67.12
KRH21628	Soybean	nucleus, plastid	65.2	65.78
Bra016835.1-P	Field mustard	plastid	64.76	63.36
AT1G11430.1	Thale cress	plastid	64.76	63.36
PGSC0003DMT400055883	Potato	plastid	61.67	61.95
CDY49781	Canola	plastid	65.2	61.67
Solyc02g079770.2.1	Tomato	plastid	61.23	61.5
CDY57037	Canola	mitochondrion	64.76	56.76
Bra019853.1-P	Field mustard	plastid	64.76	54.65
TraesCS4A01G437100.1	Wheat	mitochondrion	34.36	33.19
TraesCS2A01G437600.1	Wheat	plastid	31.28	33.18
TraesCS7A01G050200.1	Wheat	mitochondrion	33.92	32.63
TraesCS6A01G314700.1	Wheat	mitochondrion	35.24	31.75
TraesCS6A01G005300.1	Wheat	plastid	31.72	28.8
TraesCS3A01G476100.2	Wheat	plastid	21.59	27.53
TraesCS4A01G203900.1	Wheat	nucleus	40.97	22.46
TraesCS5A01G291000.1	Wheat	mitochondrion	35.24	20.1
TraesCS7A01G262500.1	Wheat	mitochondrion	34.8	18.99

Protein Annotations

EnsemblPlants:TraesCS7A01G307000.1	EnsemblPlantsGene:TraesCS7A01G307000	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009941	GO:GO:0009987	GO:GO:1900865	PANTHER:PTHR31346	PANTHER:PTHR31346:SF3	SEG:seg
MapMan:16.12.5.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:433417633..433419470

Molecular Weight (calculated)

24720.3 Da

IEP (calculated)

9.424

GRAVY (calculated)

-0.478

Length

227 amino acids

Sequence
(BLAST)

001: MAALPTAAAA GRVAASAFTF PAKPSASSLA AFLPRAAAAA AAFPAIALAP AGALQRRRRP TAAGAAPGSE QRETILLPGC DYNHWLIVME FPKDPAPTRE
101: QMIDTYLNTL ATVLGSMEEA KKNMYAFSTT TYTGFQCTVD EETSEKFKGL PGVLWVLPDS YIDVKNKDYG GDKYINGEII PCTYPTYQPK ERRTSKYESR
201: RYERRRDGPP ASRKPKQQAT QPESASS

Best Arabidopsis Sequence Match ( AT1G11430.1 )
(BLAST)

001: MASFTTTSSS SLLLKTLLPV SHLNRFSTLS GIRVGDSWTP LLRNISTAGS RRRVAIVKAA TVDSDYSSKR SNSNEQRETI MLPGCDYNHW LIVMEFPKDP
101: APSRDQMIDT YLNTLATVLG SMEEAKKNMY AFSTTTYTGF QCTIDEETSE KFKGLPGVLW VLPDSYIDVK NKDYGGDKYI NGEIIPCTYP TYQPKQRNNT
201: KYQSKRYERK RDGPPPPEQR KPRQEPAASD SS

Arabidopsis Description

MORF9Multiple organellar RNA editing factor 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LPZ1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.