Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS6A01G274500.1 | |
| TraesCS6B01G302000.1 | |
| TraesCS6D01G254800.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15000.1 | TraesCS6A01G274500.1 | AT3G27960.1 | 21798944 |
| AT3G15000.1 | TraesCS6B01G302000.1 | AT3G27960.1 | 21798944 |
| AT3G15000.1 | TraesCS6D01G254800.1 | AT3G27960.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G289900.1 | Wheat | nucleus | 99.25 | 98.01 |
| TraesCS5D01G298300.2 | Wheat | mitochondrion | 98.24 | 97.26 |
| HORVU5Hr1G077020.3 | Barley | mitochondrion | 94.97 | 92.87 |
| TraesCS7A01G262500.1 | Wheat | mitochondrion | 65.33 | 62.5 |
| CDY20096 | Canola | plastid | 44.22 | 56.05 |
| Bra021584.1-P | Field mustard | plastid | 45.98 | 54.95 |
| CDX97626 | Canola | plastid | 49.5 | 54.12 |
| CDX82454 | Canola | mitochondrion, plastid | 52.51 | 53.73 |
| CDX98522 | Canola | plastid | 50.0 | 53.64 |
| CDX75801 | Canola | mitochondrion, plastid | 53.02 | 52.88 |
| GSMUA_Achr6P08230_001 | Banana | mitochondrion | 53.77 | 52.84 |
| AT3G15000.1 | Thale cress | plastid | 51.76 | 52.15 |
| Bra027285.1-P | Field mustard | plastid | 52.51 | 51.99 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 52.76 | 51.98 |
| Solyc10g007180.2.1 | Tomato | plastid | 51.01 | 51.92 |
| GSMUA_Achr10P... | Banana | mitochondrion | 56.78 | 51.6 |
| Bra001578.1-P | Field mustard | plastid | 47.99 | 51.48 |
| KRH27318 | Soybean | nucleus | 45.98 | 50.41 |
| PGSC0003DMT400039805 | Potato | plastid | 51.01 | 50.37 |
| VIT_19s0014g01550.t01 | Wine grape | plastid | 52.51 | 49.64 |
| PGSC0003DMT400054809 | Potato | mitochondrion | 51.26 | 49.63 |
| KRH21995 | Soybean | plastid | 48.99 | 48.63 |
| Solyc12g014230.1.1 | Tomato | nucleus | 51.51 | 47.79 |
| TraesCS6A01G314700.1 | Wheat | mitochondrion | 27.89 | 44.05 |
| CDY32326 | Canola | cytosol | 38.69 | 43.63 |
| AT1G53260.1 | Thale cress | cytosol | 27.39 | 40.22 |
| TraesCS2A01G437600.1 | Wheat | plastid | 20.35 | 37.85 |
| TraesCS4A01G437100.1 | Wheat | mitochondrion | 21.36 | 36.17 |
| TraesCS7A01G050200.1 | Wheat | mitochondrion | 21.36 | 36.02 |
| TraesCS7A01G307000.1 | Wheat | plastid | 20.1 | 35.24 |
| TraesCS6A01G005300.1 | Wheat | plastid | 19.6 | 31.2 |
| TraesCS3A01G476100.2 | Wheat | plastid | 12.06 | 26.97 |
| TraesCS4A01G203900.1 | Wheat | nucleus | 23.12 | 22.22 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G291000.1 | EnsemblPlantsGene:TraesCS5A01G291000 | PANTHER:PTHR31346 | PANTHER:PTHR31346:SF4 | SEG:seg | MapMan:16.12.5.1 |
Description
No Description!
Coordinates
chr5A:-:501918007..501921220
Molecular Weight (calculated)
42405.7 Da
IEP (calculated)
9.119
GRAVY (calculated)
-0.949
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASRALLL SRASPLHAAA SRFLRPVAAA GSLLPAALVP SPAAAPWAAA RRFATQPANS SLRDSSPNWS NRPPKETILL DGCDFEHWLV VMEPPPGDGA
101: NPDVTRDEII DGYIKTLAQV VGSEDEARMK IYSVSTRHYF AFGALVSEEL SYKLKELPKV RWVLPDSYLD VRNKDYGDGQ AVPYDPKYHE EWVRNNARAN
201: ERSRRNDRPR NFDRSRNFER RRENTQAYQS GPPNQMPPHD AAPPSRGAQG PPPPSGAPPN YQPHAPNPQA GYAAGGGPNY PNAPPPPGYR GAPAPGYQAG
301: NQGYQGNPGG NMHNGPGPAY HSNNPGYQGG APGGNPPPPF AGGNQPPPYH GGGPSYGGGA PDYQGQPGGN PGYQGGGNYS NAAPPPYEGR DGPGRNYQ
101: NPDVTRDEII DGYIKTLAQV VGSEDEARMK IYSVSTRHYF AFGALVSEEL SYKLKELPKV RWVLPDSYLD VRNKDYGDGQ AVPYDPKYHE EWVRNNARAN
201: ERSRRNDRPR NFDRSRNFER RRENTQAYQS GPPNQMPPHD AAPPSRGAQG PPPPSGAPPN YQPHAPNPQA GYAAGGGPNY PNAPPPPGYR GAPAPGYQAG
301: NQGYQGNPGG NMHNGPGPAY HSNNPGYQGG APGGNPPPPF AGGNQPPPYH GGGPSYGGGA PDYQGQPGGN PGYQGGGNYS NAAPPPYEGR DGPGRNYQ
001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA
Arabidopsis Description
MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.