Factsheet for Bra027285.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
plastid 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009045.1-P
Bra025315.1-P
Bra031892.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15000.1	Bra025315.1-P	AT3G27960.1	21798944
AT3G15000.1	Bra009045.1-P	AT5G10270.1	12678503
AT3G15000.1	Bra031892.1-P	AT5G64960.1	12678503

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98522	Canola	plastid	90.8	98.38
CDX97626	Canola	plastid	88.06	97.25
AT3G15000.1	Thale cress	plastid	85.32	86.84
Bra001578.1-P	Field mustard	plastid	79.35	85.98
Bra021584.1-P	Field mustard	plastid	69.65	84.08
VIT_19s0014g01550.t01	Wine grape	plastid	67.91	64.85
KRH27318	Soybean	nucleus	55.97	61.98
Solyc10g007180.2.1	Tomato	plastid	56.72	58.31
KRH21995	Soybean	plastid	57.96	58.1
PGSC0003DMT400039805	Potato	plastid	57.21	57.07
PGSC0003DMT400054809	Potato	mitochondrion	57.21	55.96
EER92766	Sorghum	mitochondrion	53.98	55.93
Os09t0509000-01	Rice	plastid	54.23	55.05
Os09t0132600-01	Rice	mitochondrion	53.73	54.27
Solyc12g014230.1.1	Tomato	nucleus	57.46	53.85
TraesCS5B01G289900.1	Wheat	nucleus	53.23	53.1
TraesCS5D01G298300.2	Wheat	mitochondrion	52.99	52.99
TraesCS5B01G290000.1	Wheat	mitochondrion, plastid	44.28	52.82
EER92767	Sorghum	mitochondrion	45.52	52.74
TraesCS5A01G291000.1	Wheat	mitochondrion	51.99	52.51
HORVU5Hr1G077020.3	Barley	mitochondrion	52.99	52.33
Zm00001d048291_P001	Maize	mitochondrion	51.99	50.98
TraesCS7B01G160200.1	Wheat	mitochondrion	50.99	49.28
Bra001218.1-P	Field mustard	cytosol	17.16	48.94
TraesCS7A01G262500.1	Wheat	mitochondrion	50.5	48.8
GSMUA_Achr6P08230_001	Banana	mitochondrion	48.01	47.65
TraesCS7D01G263300.1	Wheat	mitochondrion	50.99	47.56
HORVU7Hr1G054850.2	Barley	plastid	50.75	47.11
GSMUA_AchrUn_...	Banana	mitochondrion	47.26	47.03
GSMUA_Achr10P...	Banana	mitochondrion	50.5	46.35
Bra040292.1-P	Field mustard	mitochondrion, plastid	27.86	45.34
Bra016051.1-P	Field mustard	mitochondrion	19.65	43.17
Bra003876.1-P	Field mustard	mitochondrion	19.65	41.58
Bra017328.1-P	Field mustard	cytosol	18.16	39.25
Bra017613.1-P	Field mustard	plastid	6.47	38.24
Bra005357.1-P	Field mustard	plastid	21.89	37.61
Bra005495.1-P	Field mustard	plastid	21.14	36.96
Bra021852.1-P	Field mustard	plastid	20.4	36.94
Bra036402.1-P	Field mustard	mitochondrion, plastid	19.9	35.87
Bra023005.1-P	Field mustard	endoplasmic reticulum	7.46	32.26
OQU89756	Sorghum	plastid	32.34	30.37
Bra016835.1-P	Field mustard	plastid	17.41	30.17
Bra013439.1-P	Field mustard	mitochondrion	24.88	25.97
Bra019853.1-P	Field mustard	plastid	17.16	25.65
Bra012522.1-P	Field mustard	mitochondrion, plastid	23.13	23.97
Bra025105.1-P	Field mustard	mitochondrion	22.39	12.28

Protein Annotations

EnsemblPlants:Bra027285.1	EnsemblPlants:Bra027285.1-P	EnsemblPlantsGene:Bra027285	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF4	SEG:seg	UniParc:UPI0002547B27
UniProt:M4EES3	MapMan:16.12.5.1	:	:	:	:

Description

AT3G15000 (E=1e-107) | LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 50779 Blast hits to 24732 proteins in 941 species: Archae - 10; Bacteria - 4862; Metazoa - 25623; Fungi - 7071; Plants - 6957; Viruses - 900; Other Eukaryotes - 5356 (source: NCBI BLink).

Coordinates

chrA05:-:20114729..20116518

Molecular Weight (calculated)

43480.7 Da

IEP (calculated)

9.595

GRAVY (calculated)

-0.955

Length

402 amino acids

Sequence
(BLAST)

001: MATHSISRSI LCRPAKSLSF LFTRSFASSS APLAKSPATS LYTSSLLTRS RPLVAALSSA FRGGLVSVKG LSSQATASSL NDPSPNWSNR PPKETILLDG
101: CDFEHWLVVV DPPEGDPTRD EIIDSYIKTL AQIVGSEEEA RMKIYSVSTR CYFAFGALVS EDLSHKLKEL PKVRWVLPDS YLDVRNKDYG GEPFIDGKAV
201: PYDPKYHEEW IRNNARANER NRRNDRPKNF DRSRNFERRR ENMAGGPPPQ RPPMGGPPPP HMGGSAPPPP PMGQNYGQRP PPNYGGPPPP HNNMGGQRPP
301: ANYGGAPPPP PNYGGPPPPN YGGTPPQNNM GGAPPPNYGG APPPNYGGPP PQNNMGGGGP PNAGWSGNNN NYQQQQGGGM QQPQYQNNYP PNRDGSGNPY
401: QG

Best Arabidopsis Sequence Match ( AT3G15000.1 )
(BLAST)

001: MATHTISRSI LCRPAKSLSF LFTRSFASSA PLAKSPASSL LSRSRPLVAA FSSVFRGGLV SVKGLSTQAT SSSLNDPNPN WSNRPPKETI LLDGCDFEHW
101: LVVVEPPQGE PTRDEIIDSY IKTLAQIVGS EDEARMKIYS VSTRCYYAFG ALVSEDLSHK LKELSNVRWV LPDSYLDVRN KDYGGEPFID GKAVPYDPKY
201: HEEWIRNNAR ANERNRRNDR PRNNDRSRNF ERRRENMAGG PPPQRPPMGG PPPPPHIGGS APPPPHMGGS APPPPHMGQN YGPPPPNNMG GPRHPPPYGA
301: PPQNNMGGPR PPQNYGGTPP PNYGGAPPAN NMGGAPPPNY GGGPPPQYGA VPPPQYGGAP PQNNNYQQQG SGMQQPQYQN NYPPNRDGSG NPYQG

Arabidopsis Description

MORF8Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LKA5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.