Factsheet for Bra040292.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34929	Canola	cytosol	55.87	98.57
Bra001218.1-P	Field mustard	cytosol	52.23	91.49
AT3G06790.2	Thale cress	mitochondrion	80.57	81.56
VIT_05s0077g01880.t01	Wine grape	mitochondrion	70.85	67.31
Solyc01g066060.2.1	Tomato	plastid	69.64	66.41
Os03t0581600-01	Rice	mitochondrion	60.73	65.79
PGSC0003DMT400043314	Potato	mitochondrion, plastid	69.23	65.77
KRH02286	Soybean	mitochondrion	64.78	64.78
KRH50805	Soybean	mitochondrion	65.18	64.66
GSMUA_Achr8P22480_001	Banana	mitochondrion	66.8	63.71
GSMUA_Achr11P...	Banana	mitochondrion	64.37	62.85
EES12861	Sorghum	mitochondrion	61.94	62.7
Zm00001d026307_P001	Maize	mitochondrion	61.13	61.38
TraesCS6B01G344700.2	Wheat	mitochondrion	62.35	60.87
TraesCS6D01G294000.1	Wheat	mitochondrion	61.94	60.71
TraesCS6A01G314700.1	Wheat	mitochondrion	61.54	60.32
HORVU6Hr1G077460.3	Barley	plastid	61.13	56.98
Bra017328.1-P	Field mustard	cytosol	31.58	41.94
Bra017613.1-P	Field mustard	plastid	11.34	41.18
Bra021852.1-P	Field mustard	plastid	34.82	38.74
Bra005495.1-P	Field mustard	plastid	35.63	38.26
Bra016835.1-P	Field mustard	plastid	34.82	37.07
Bra005357.1-P	Field mustard	plastid	34.41	36.32
Bra036402.1-P	Field mustard	mitochondrion, plastid	32.39	35.87
Bra016051.1-P	Field mustard	mitochondrion	23.48	31.69
Bra019853.1-P	Field mustard	plastid	34.41	31.6
Bra021584.1-P	Field mustard	plastid	42.51	31.53
Bra023005.1-P	Field mustard	endoplasmic reticulum	11.34	30.11
Bra001578.1-P	Field mustard	plastid	43.72	29.11
Bra003876.1-P	Field mustard	mitochondrion	22.27	28.95
Bra027285.1-P	Field mustard	plastid	45.34	27.86
Bra013439.1-P	Field mustard	mitochondrion	32.79	21.04
Bra012522.1-P	Field mustard	mitochondrion, plastid	31.58	20.1
Bra025105.1-P	Field mustard	mitochondrion	27.53	9.28

Protein Annotations

EnsemblPlants:Bra040292.1	EnsemblPlants:Bra040292.1-P	EnsemblPlantsGene:Bra040292	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF1	SEG:seg	UniParc:UPI0002544AFD
UniProt:M4FGR4	MapMan:16.12.5.1	:	:	:	:

Description

AT3G06790 (E=3e-093) | plastid developmental protein DAG, putative

Coordinates

chrA01:+:28067765..28068917

Molecular Weight (calculated)

27822.7 Da

IEP (calculated)

8.807

GRAVY (calculated)

-0.691

Length

247 amino acids

Sequence
(BLAST)

001: MAHFTVRRKL ATVLTDTLSS STSSYSSFST LSSRSRFALP LIDKLSSTRT GLGPCYVTTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFADPKPTE DEMISAYVKT LTSVVGSEEE AKKKIYSVCT STYTGFGALI SEELSCKVKG LPGVLWVLPD SYLDVPNKDY GGDLYIEGKV IPRPQYRFTE
201: QRQTRNRSRP RYDRRRETVQ VERREPTSQN WNQNQPPASM GNQAPES

Best Arabidopsis Sequence Match ( AT3G06790.2 )
(BLAST)

001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA

Arabidopsis Description

MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.