Factsheet for Bra003876.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 5
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65020	Canola	mitochondrion	94.74	94.74
CDX68262	Canola	mitochondrion	93.68	93.68
Bra016051.1-P	Field mustard	mitochondrion	85.79	89.07
AT1G72530.2	Thale cress	mitochondrion	84.21	83.33
VIT_09s0002g01100.t01	Wine grape	mitochondrion	58.42	52.36
Bra017613.1-P	Field mustard	plastid	11.58	32.35
Bra001218.1-P	Field mustard	cytosol	21.05	28.37
Bra017328.1-P	Field mustard	cytosol	27.37	27.96
Bra036402.1-P	Field mustard	mitochondrion, plastid	28.95	24.66
Bra005357.1-P	Field mustard	plastid	30.0	24.36
Bra021852.1-P	Field mustard	plastid	28.42	24.32
Bra005495.1-P	Field mustard	plastid	28.95	23.91
Bra023005.1-P	Field mustard	endoplasmic reticulum	11.58	23.66
Bra040292.1-P	Field mustard	mitochondrion, plastid	28.95	22.27
Bra021584.1-P	Field mustard	plastid	38.42	21.92
Bra016835.1-P	Field mustard	plastid	26.32	21.55
Bra027285.1-P	Field mustard	plastid	41.58	19.65
Bra019853.1-P	Field mustard	plastid	25.79	18.22
Bra001578.1-P	Field mustard	plastid	34.21	17.52
Bra013439.1-P	Field mustard	mitochondrion	25.79	12.73
Bra012522.1-P	Field mustard	mitochondrion, plastid	24.21	11.86
Bra025105.1-P	Field mustard	mitochondrion	24.74	6.41

Protein Annotations

EnsemblPlants:Bra003876.1	EnsemblPlants:Bra003876.1-P	EnsemblPlantsGene:Bra003876	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF6	SEG:seg	UniParc:UPI00025417AE
UniProt:M4CI43	MapMan:16.12.5.1	:	:	:	:

Description

AT1G72530 (E=3e-085) | plastid developmental protein DAG, putative

Coordinates

chrA07:-:15502524..15503450

Molecular Weight (calculated)

21512.7 Da

IEP (calculated)

9.441

GRAVY (calculated)

-0.471

Length

190 amino acids

Sequence
(BLAST)

001: MASIIRRPSN LTAAVVRFRL APLLPFSGSS GSVNSDTTRC SELVRVPSLV EGCDYKHWLV LMKPPNGYPP RNDIVQGFIK TLAMALGSEE EAKKSIYSVS
101: TKYYYAFGCR VHEHLTYKIR SLPDVRWVLP DSFIVDGGDS GYGGEPFVDG EVVPYDEKYH ADWLRDQTDE DAKNRLVKKK PRRKINKKLN

Best Arabidopsis Sequence Match ( AT1G72530.1 )
(BLAST)

001: MARIIRRPLN LTAAVRFRLS PLSPFSGNSG SINSETTSWS ELIRVPSLVE GCDYKHWLVL MKPPNGYPTR NHIVQSFVET LAMALGSEEE AKRSIYSVST
101: KYYYAFGCRI HEPLTYKIRS LPDVKWVLPD SFIVDGDNRY GGEPFVDGEV VPYDEKYHAD WLRDQTDEDA KSGVVKKKHR RKRKKKLI

Arabidopsis Description

Plastid developmental protein DAG [Source:UniProtKB/TrEMBL;Acc:F4IDD2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.