Factsheet for Bra013439.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78969	Canola	mitochondrion	96.62	97.13
Bra012522.1-P	Field mustard	mitochondrion, plastid	79.74	79.12
AT4G20020.1	Thale cress	mitochondrion	77.66	71.36
VIT_12s0035g00240.t01	Wine grape	mitochondrion	44.94	42.93
Bra001218.1-P	Field mustard	cytosol	15.06	41.13
Bra017613.1-P	Field mustard	plastid	7.01	39.71
Bra016835.1-P	Field mustard	plastid	21.82	36.21
Os11t0216400-01	Rice	mitochondrion	33.77	34.76
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	37.92	33.95
TraesCS4D01G104800.2	Wheat	mitochondrion	36.62	33.89
GSMUA_Achr1P22060_001	Banana	mitochondrion	34.03	33.59
Zm00001d049043_P001	Maize	mitochondrion	35.58	33.41
TraesCS4A01G203900.1	Wheat	nucleus	35.84	33.33
Bra017328.1-P	Field mustard	cytosol	15.84	32.8
TraesCS4B01G107700.2	Wheat	mitochondrion	36.88	32.79
Bra040292.1-P	Field mustard	mitochondrion, plastid	21.04	32.79
Bra036402.1-P	Field mustard	mitochondrion, plastid	18.7	32.29
KRH44085	Soybean	mitochondrion, plastid	38.44	32.03
KRH26355	Soybean	mitochondrion	37.92	31.6
Bra005495.1-P	Field mustard	plastid	18.7	31.3
Bra019853.1-P	Field mustard	plastid	21.82	31.23
Bra021852.1-P	Field mustard	plastid	17.66	30.63
EES08356	Sorghum	mitochondrion	35.58	30.58
PGSC0003DMT400057561	Potato	mitochondrion, plastid	37.14	30.43
Solyc02g079210.2.1	Tomato	plastid	36.1	30.22
Bra005357.1-P	Field mustard	plastid	18.18	29.91
Bra016051.1-P	Field mustard	mitochondrion	12.73	26.78
Bra021584.1-P	Field mustard	plastid	22.34	25.83
Bra003876.1-P	Field mustard	mitochondrion	12.73	25.79
Bra001578.1-P	Field mustard	plastid	24.68	25.61
Bra027285.1-P	Field mustard	plastid	25.97	24.88
Bra025105.1-P	Field mustard	mitochondrion	47.27	24.83
Bra023005.1-P	Field mustard	endoplasmic reticulum	5.45	22.58

Protein Annotations

EnsemblPlants:Bra013439.1	EnsemblPlants:Bra013439.1-P	EnsemblPlantsGene:Bra013439	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	SEG:seg	UniParc:UPI000254682B
UniProt:M4DAC9	MapMan:16.12.5.1	:	:	:	:

Description

AT4G20020 (E=3e-081) | unknown protein

Coordinates

chrA01:-:5670137..5672289

Molecular Weight (calculated)

41249.6 Da

IEP (calculated)

8.492

GRAVY (calculated)

-0.992

Length

385 amino acids

Sequence
(BLAST)

001: MAMYSHRLRR ALLTTTSCLN RSITLSPSSS VAPTSVTPSV STVLQRSVLG RFTGASRAPA RLFSTRQYKL YKEGDEITEN TVLFEGCDYN HWLITMDFPK
101: DSPLSPEEMV STYEKTCAAG LGISLEEAKN KIYACSTTTY QGFQAIMTEE ESEKFKDLPG VVFILPDSYI DPANKEYGGD KYENGVITHR PPPFQPNRRQ
201: PRDKFNQRPD RQGGPQNFQR NPQYGQQPPM QGGGGGGGYG GPPQSYGPPG QAPPSPFQGG YNQGPPRSPP PPYQGGYNQG QGSPVPPYQG PPGGYGQGGP
301: GNFNQGPQGG YNQGGGPRNY GPQGGGNYGP APGAGAPNPG FGQGYGGPGQ EQNQTFPQGD QRNVAGDWNN NNPAGQPGPD QGRRY

Best Arabidopsis Sequence Match ( AT4G20020.2 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQF
401: PQGRRY

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.