Factsheet for PGSC0003DMT400057561

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 5
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g079210.2.1	Tomato	plastid	90.85	92.83
PGSC0003DMT400055883	Potato	plastid	21.28	44.25
VIT_12s0035g00240.t01	Wine grape	mitochondrion	33.83	39.45
CDX78969	Canola	mitochondrion	31.06	38.12
GSMUA_Achr1P22060_001	Banana	mitochondrion	31.06	37.44
CDY50054	Canola	mitochondrion	30.21	37.37
Os11t0216400-01	Rice	mitochondrion	29.57	37.17
Bra013439.1-P	Field mustard	mitochondrion	30.43	37.14
KRH26355	Soybean	mitochondrion	36.38	37.01
TraesCS4D01G104800.2	Wheat	mitochondrion	32.55	36.78
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	33.62	36.74
CDX98651	Canola	mitochondrion	25.11	36.53
TraesCS4A01G203900.1	Wheat	nucleus	32.13	36.47
Bra012522.1-P	Field mustard	mitochondrion, plastid	29.79	36.08
CDY01629	Canola	mitochondrion	30.0	35.88
TraesCS4B01G107700.2	Wheat	mitochondrion	32.98	35.8
KRH44085	Soybean	mitochondrion, plastid	35.11	35.71
Zm00001d049043_P001	Maize	mitochondrion	31.06	35.61
PGSC0003DMT400043314	Potato	mitochondrion, plastid	18.09	32.69
EES08356	Sorghum	mitochondrion	30.85	32.37
PGSC0003DMT400060429	Potato	plastid	15.96	32.05
PGSC0003DMT400038117	Potato	plastid	15.74	32.03
AT4G20020.1	Thale cress	mitochondrion	28.51	31.98
PGSC0003DMT400039805	Potato	plastid	21.91	25.56
PGSC0003DMT400054809	Potato	mitochondrion	20.85	23.84
CDY60655	Canola	plastid	29.57	19.25
AT5G44780.1	Thale cress	mitochondrion	29.57	19.23
Bra025105.1-P	Field mustard	mitochondrion	28.72	18.42

Protein Annotations

EnsemblPlants:PGSC0003DMT400057561	EnsemblPlantsGene:PGSC0003DMG400022353	EntrezGene:102596539	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	PGSC:PGSC0003DMG400022353	RefSeq:XP_006347142.1
SEG:seg	UniParc:UPI000295B0F5	UniProt:M1C1A4	MapMan:16.12.5.1	:	:

Description

DAG [Source:PGSC_GENE;Acc:PGSC0003DMG400022353]

Coordinates

chr2:-:34943461..34947570

Molecular Weight (calculated)

52481.9 Da

IEP (calculated)

8.034

GRAVY (calculated)

-1.215

Length

470 amino acids

Sequence
(BLAST)

001: MALYTSRLRR ALPLSSSIFA QTFHQPNLIS PIASLSQSSS TQSNLSKFNR FDFPSQSRLF RSSTISLSSR SRSFDRNPAD DEIGPDTILF EGCDYEHWLI
101: VIDFPKDTQL TREEMIETYV QTAAKVFGSV EEAKKKIYAL STTTYRGFQV LCSEDTSKKF EGLPGVVFVL PDSYIDPVNK EYGGDKYNNG EIIERPPPPQ
201: FQRQGSKPRR GPQYQQGNYR PSQSPPQQNF GPAQGHPPQQ NYGAAQGPPP QQNYDAPQGP PPQQNYGPPR YPPPQQNYGS QQYAPPPQQN YRQPQGPSPQ
301: QNYERPQNPQ PNQSYSAPQN VPSQWNHGRQ QSFAPQQSYG PQGAGDHRGP APPDSNLDGW DNSQVEWQNS RHLQRDQGNC FPQRDQRGGA PPEQGGFGGV
401: QHYGSQQGGS SGQQTFGGQP LRYGPTFGRN NPRPGGNQNF PPMEQQGNMQ GGEQRTYESS GTMGTDQERY

Best Arabidopsis Sequence Match ( AT4G20020.2 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQF
401: PQGRRY

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.