Factsheet for PGSC0003DMT400043314

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g066060.2.1	Tomato	plastid	96.54	96.91
CDY34929	Canola	cytosol	40.38	75.0
Bra001218.1-P	Field mustard	cytosol	40.38	74.47
VIT_05s0077g01880.t01	Wine grape	mitochondrion	72.31	72.31
CDX74079	Canola	cytosol	40.77	72.11
Os03t0581600-01	Rice	mitochondrion	61.54	70.18
CDY08033	Canola	mitochondrion	57.31	69.3
Bra040292.1-P	Field mustard	mitochondrion, plastid	65.77	69.23
AT3G06790.2	Thale cress	mitochondrion	64.62	68.85
KRH50805	Soybean	mitochondrion	65.77	68.67
GSMUA_Achr8P22480_001	Banana	mitochondrion	66.92	67.18
KRH02286	Soybean	mitochondrion	62.69	65.99
Zm00001d026307_P001	Maize	mitochondrion	62.31	65.85
EES12861	Sorghum	mitochondrion	61.54	65.57
TraesCS6B01G344700.2	Wheat	mitochondrion	63.08	64.82
TraesCS6D01G294000.1	Wheat	mitochondrion	62.69	64.68
TraesCS6A01G314700.1	Wheat	mitochondrion	62.31	64.29
GSMUA_Achr11P...	Banana	mitochondrion	62.31	64.03
HORVU6Hr1G077460.3	Barley	plastid	61.54	60.38
PGSC0003DMT400038117	Potato	plastid	32.31	36.36
PGSC0003DMT400055883	Potato	plastid	31.54	36.28
PGSC0003DMT400060429	Potato	plastid	31.92	35.47
PGSC0003DMT400039805	Potato	plastid	45.77	29.53
PGSC0003DMT400054809	Potato	mitochondrion	46.15	29.2
PGSC0003DMT400057561	Potato	mitochondrion, plastid	32.69	18.09

Protein Annotations

EnsemblPlants:PGSC0003DMT400043314	EnsemblPlantsGene:PGSC0003DMG400016815	EntrezGene:102593042	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF1	PGSC:PGSC0003DMG400016815	RefSeq:XP_006354278.1
SEG:seg	UniParc:UPI000296B24E	UniProt:M1BEF3	MapMan:16.12.5.1	:	:

Description

DAG protein, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400016815]

Coordinates

chr1:+:10552358..10559781

Molecular Weight (calculated)

29293.3 Da

IEP (calculated)

9.158

GRAVY (calculated)

-0.712

Length

260 amino acids

Sequence
(BLAST)

001: MALFATRRTL ASTIYRALSS SSSSSSSSSS SRFRFVLPLF FNPQYYPSEQ FVPTRPKSTG SGYSPLNDPS PNWSNRPPKE TILLDGCDYE HWLIVMEFPE
101: PKPSEEDMIN AYVKTIAAVV GSEEEAKKKI YSVCTTTYTG FGVLISEELS YKVKGLPGVL WVLPDSYLDV PNKDYGGDQF IDGKVIHRPQ YRFNQNQSTR
201: PRPRPRYDRR RETMQVERRE PIQRGAWVPN QQHPAQPVSI EGQNFSHGTG GPAGSQGNNS

Best Arabidopsis Sequence Match ( AT3G06790.2 )
(BLAST)

001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA

Arabidopsis Description

MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.