Factsheet for VIT_05s0077g01880.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001218.1-P	Field mustard	cytosol	41.92	77.31
CDY34929	Canola	cytosol	40.77	75.71
CDX74079	Canola	cytosol	42.69	75.51
CDY08033	Canola	mitochondrion	60.38	73.02
Solyc01g066060.2.1	Tomato	plastid	72.69	72.97
PGSC0003DMT400043314	Potato	mitochondrion, plastid	72.31	72.31
KRH50805	Soybean	mitochondrion	68.08	71.08
Os03t0581600-01	Rice	mitochondrion	62.31	71.05
GSMUA_Achr8P22480_001	Banana	mitochondrion	70.77	71.04
Bra040292.1-P	Field mustard	mitochondrion, plastid	67.31	70.85
KRH02286	Soybean	mitochondrion	66.54	70.04
AT3G06790.2	Thale cress	mitochondrion	64.62	68.85
EES12861	Sorghum	mitochondrion	64.62	68.85
TraesCS6B01G344700.2	Wheat	mitochondrion	66.54	68.38
TraesCS6A01G314700.1	Wheat	mitochondrion	66.15	68.25
TraesCS6D01G294000.1	Wheat	mitochondrion	65.77	67.86
GSMUA_Achr11P...	Banana	mitochondrion	65.77	67.59
Zm00001d026307_P001	Maize	mitochondrion	63.46	67.07
HORVU6Hr1G077460.3	Barley	plastid	64.23	63.02
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	36.15	39.83
VIT_05s0049g01500.t01	Wine grape	plastid	35.0	39.06
VIT_19s0014g04710.t01	Wine grape	plastid	32.69	37.12
VIT_09s0002g01100.t01	Wine grape	mitochondrion	26.54	32.55
VIT_19s0014g01550.t01	Wine grape	plastid	48.46	29.93
VIT_12s0035g00240.t01	Wine grape	mitochondrion	33.08	21.34

Protein Annotations

EntrezGene:100260219	wikigene:100260219	MapMan:16.12.5.1	UniProt:A5AMS0	EMBL:AM430323	ProteinID:CAN69219
ProteinID:CAN69219.1	ProteinID:CBI22962	ProteinID:CBI22962.3	EMBL:FN595246	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016554	EntrezGene:LOC100260219	wikigene:LOC100260219	PANTHER:PTHR31346
PANTHER:PTHR31346:SF1	UniParc:UPI000151F00B	ArrayExpress:VIT_05s0077g01880	EnsemblPlantsGene:VIT_05s0077g01880	EnsemblPlants:VIT_05s0077g01880.t01	unigene:Vvi.20761
RefSeq:XP_002272388	RefSeq:XP_002272388.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:-:1475107..1476871

Molecular Weight (calculated)

29651.9 Da

IEP (calculated)

9.411

GRAVY (calculated)

-0.798

Length

260 amino acids

Sequence
(BLAST)

001: MALFTGRRTL ARFLSRTLSQ SFSSSSLLAS SRSRFAFALI DKHSPPLVSN SARVPTRLKT SGSGYSPLND PSPNWSNRPP KETILLDGCD YEHWLIVMEF
101: PNDSKPSEDE MIAAYVKTLA AVVGSEEEAK KKIYSVCTTT YTGFGALISE ELSYKVKELP GVLWVLPDSY LDVPNKDYGG DLFIDGKVIH RPQYRYNERQ
201: PTRSRPRPRY DRRRETMQVE RREPMQRDNW AQDRREPMHQ PTSMNDQNSP QGGGRDPSLN

Best Arabidopsis Sequence Match ( AT3G06790.2 )
(BLAST)

001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA

Arabidopsis Description

MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.