CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d026307_P001	Maize	mitochondrion	91.8	91.06
Os03t0581600-01	Rice	mitochondrion	79.92	85.53
TraesCS6D01G294000.1	Wheat	mitochondrion	84.43	81.75
TraesCS6A01G314700.1	Wheat	mitochondrion	83.61	80.95
TraesCS6B01G344700.2	Wheat	mitochondrion	83.2	80.24
HORVU6Hr1G077460.3	Barley	plastid	82.79	76.23
CDY34929	Canola	cytosol	41.39	72.14
Bra001218.1-P	Field mustard	cytosol	40.57	70.21
CDX74079	Canola	cytosol	40.98	68.03
GSMUA_Achr8P22480_001	Banana	mitochondrion	72.13	67.95
GSMUA_Achr11P...	Banana	mitochondrion	68.03	65.61
VIT_05s0077g01880.t01	Wine grape	mitochondrion	68.85	64.62
AT3G06790.2	Thale cress	mitochondrion	63.52	63.52
CDY08033	Canola	mitochondrion	55.74	63.26
KRH50805	Soybean	mitochondrion	63.52	62.25
Bra040292.1-P	Field mustard	mitochondrion, plastid	62.7	61.94
Solyc01g066060.2.1	Tomato	plastid	65.57	61.78
KRH02286	Soybean	mitochondrion	62.3	61.54
PGSC0003DMT400043314	Potato	mitochondrion, plastid	65.57	61.54
EES11377	Sorghum	mitochondrion, plastid	33.2	37.5
EER87743	Sorghum	mitochondrion	33.2	36.49
EES14516	Sorghum	plastid	33.2	36.0
EER92767	Sorghum	mitochondrion	43.85	30.84
EER92766	Sorghum	mitochondrion	47.13	29.64
OQU89756	Sorghum	plastid	35.66	20.33
EES08356	Sorghum	mitochondrion	30.33	16.52

Protein Annotations

MapMan:16.12.5.1	EntrezGene:8066787	UniProt:C5YG24	EnsemblPlants:EES12861	ProteinID:EES12861	ProteinID:EES12861.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016554
GO:GO:0050897	GO:GO:0080156	GO:GO:1900864	PANTHER:PTHR31346	PANTHER:PTHR31346:SF1	EnsemblPlantsGene:SORBI_3006G216000
unigene:Sbi.17393	UniParc:UPI0001A87625	RefSeq:XP_002448533.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:56390944..56394072

Molecular Weight (calculated)

27206.2 Da

IEP (calculated)

9.626

GRAVY (calculated)

-0.592

Length

244 amino acids

Sequence
(BLAST)

001: MAAASATRRG LSALLLYSSR ALPRRLVPLA ASAASAHVAP WALLASRGAR TASSGGSGYS PLNDPSPNWS NRPPKETILL DGCDYEHWLI VMEFPTDPKP
101: SEEEMVGAYV KTLAAVLGSE EEAKKKIYSV CTSTYTGFGA LISEELSYKV KGLPGVLWVL PDSYLDVPNK DYGGDLFVDG KVIHRPQFRF NERQQVRSKP
201: RPRYDRRREV VQVERRETMQ RGPSTQQHRP PPFPQQATQN QEQH

Best Arabidopsis Sequence Match ( AT3G06790.2 )
(BLAST)

001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA

Arabidopsis Description

MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.