Factsheet for TraesCS6D01G294000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G344700.2	Wheat	mitochondrion	97.62	97.23
TraesCS6A01G314700.1	Wheat	mitochondrion	96.83	96.83
HORVU6Hr1G077460.3	Barley	plastid	94.05	89.43
Os03t0581600-01	Rice	mitochondrion	76.98	85.09
EES12861	Sorghum	mitochondrion	81.75	84.43
Zm00001d026307_P001	Maize	mitochondrion	77.38	79.27
Bra001218.1-P	Field mustard	cytosol	40.08	71.63
CDY34929	Canola	cytosol	39.68	71.43
CDX74079	Canola	cytosol	40.87	70.07
GSMUA_Achr8P22480_001	Banana	mitochondrion	69.44	67.57
GSMUA_Achr11P...	Banana	mitochondrion	66.27	66.01
VIT_05s0077g01880.t01	Wine grape	mitochondrion	67.86	65.77
AT3G06790.2	Thale cress	mitochondrion	62.3	64.34
CDY08033	Canola	mitochondrion	53.57	62.79
PGSC0003DMT400043314	Potato	mitochondrion, plastid	64.68	62.69
Solyc01g066060.2.1	Tomato	plastid	64.29	62.55
Bra040292.1-P	Field mustard	mitochondrion, plastid	60.71	61.94
KRH50805	Soybean	mitochondrion	60.32	61.04
KRH02286	Soybean	mitochondrion	59.13	60.32
TraesCS2D01G434600.1	Wheat	plastid	32.54	38.14
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	32.94	35.78
TraesCS7D01G303900.1	Wheat	plastid	31.35	34.65
TraesCS6D01G007100.1	Wheat	mitochondrion	32.54	34.02
TraesCS5D01G298300.2	Wheat	mitochondrion	44.84	28.11
TraesCS7D01G263300.1	Wheat	mitochondrion	45.24	26.45
TraesCS4D01G104800.2	Wheat	mitochondrion	30.16	18.27

Protein Annotations

EnsemblPlants:TraesCS6D01G294000.1	EnsemblPlantsGene:TraesCS6D01G294000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0050897	GO:GO:0080156	GO:GO:1900864	PANTHER:PTHR31346	PANTHER:PTHR31346:SF1
SEG:seg	MapMan:16.12.5.1	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:404598985..404602979

Molecular Weight (calculated)

28158.5 Da

IEP (calculated)

9.815

GRAVY (calculated)

-0.613

Length

252 amino acids

Sequence
(BLAST)

001: MAAAGVTRRR LSALLLSSRA TPRRLLLLTG AAASASSAHL SPWAPPSRGA KTALPGRPGY SPLNDPSPNW SNRPPKETIL LDGCDYEHWL IVMEFPADPK
101: PSEEDMVAAY VKTLTAVLGS EEEAKKKIYS VCTTTYTGFG ALISEELSYK VKGLPGVLWV LPDSYLDVPN KDYGGDLFVD GKVIHRPQFQ FTERQQVRSR
201: PRPRYDRRRE TMQVERRETM QRGPSVQEHR PPFSQQVAHN NGQHEIVPPG RN

Best Arabidopsis Sequence Match ( AT3G06790.2 )
(BLAST)

001: MALISTRRTL STLLNKTLSS STSYSSSFPT LSSRSRFAMP LIEKVSSSRT SLGPCYISTR PKTSGSGYSP LNDPSPNWSN RPPKETILLD GCDYEHWLIV
101: MEFTDPKPTE EEMINSYVKT LTSVLGCEEE AKKKIYSVCT STYTGFGALI SEELSCKVKA LPGVLWVLPD SYLDVPNKDY GGDLYVEGKV IPRPQYRFTE
201: QRHTRPRPRP RYDRRRETMQ VERREPSMGL HSPVNPGEFN KPSA

Arabidopsis Description

MORF3Multiple organellar RNA editing factor 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q84JZ6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.