Factsheet for TraesCS4D01G104800.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G203900.1	Wheat	nucleus	93.75	94.2
TraesCS4B01G107700.2	Wheat	mitochondrion	97.84	94.0
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	93.75	90.7
Os11t0216400-01	Rice	mitochondrion	66.83	74.33
Zm00001d049043_P001	Maize	mitochondrion	72.84	73.9
EES08356	Sorghum	mitochondrion	76.2	70.76
GSMUA_Achr1P22060_001	Banana	mitochondrion	49.04	52.31
VIT_12s0035g00240.t01	Wine grape	mitochondrion	40.87	42.18
TraesCS7D01G303900.1	Wheat	plastid	22.12	40.35
CDX78969	Canola	mitochondrion	33.89	36.81
Bra013439.1-P	Field mustard	mitochondrion	33.89	36.62
CDY50054	Canola	mitochondrion	33.41	36.58
CDX98651	Canola	mitochondrion	28.12	36.22
Bra012522.1-P	Field mustard	mitochondrion, plastid	32.93	35.31
CDY01629	Canola	mitochondrion	32.93	34.86
TraesCS2D01G434600.1	Wheat	plastid	17.55	33.95
Solyc02g079210.2.1	Tomato	plastid	36.78	33.26
PGSC0003DMT400057561	Potato	mitochondrion, plastid	36.78	32.55
AT4G20020.1	Thale cress	mitochondrion	32.69	32.46
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	18.03	32.33
KRH44085	Soybean	mitochondrion, plastid	34.62	31.17
TraesCS6D01G007100.1	Wheat	mitochondrion	18.03	31.12
KRH26355	Soybean	mitochondrion	34.38	30.95
TraesCS6D01G294000.1	Wheat	mitochondrion	18.27	30.16
TraesCS5D01G298300.2	Wheat	mitochondrion	23.56	24.38
TraesCS7D01G263300.1	Wheat	mitochondrion	22.12	21.35
CDY60655	Canola	plastid	33.65	19.39
AT5G44780.1	Thale cress	mitochondrion	33.65	19.36
Bra025105.1-P	Field mustard	mitochondrion	33.17	18.83

Protein Annotations

EnsemblPlants:TraesCS4D01G104800.2

EnsemblPlantsGene:TraesCS4D01G104800

PANTHER:PTHR31346

PANTHER:PTHR31346:SF5

SEG:seg

MapMan:16.12.5.1

Description

No Description!

Coordinates

chr4D:-:82866467..82869941

Molecular Weight (calculated)

44207.8 Da

IEP (calculated)

8.455

GRAVY (calculated)

-0.952

Length

416 amino acids

Sequence
(BLAST)

001: MALALRLRRA LAAASTSASL LRPTASAAAS PHRAPLLAPF VAPLPRPFLP GGAAGFRSTA AAAARGNYGG GADDAKIDPD EILFEGCDYN HWLITMEFPD
101: PKPSREEMIE TYLQTLAKVV GSYEEAKKRM YALSTTTYVG FQAVMTEEMS EKFRGLPGVV FILPDSYLYP ETKEYGGDKY ENGVITPRPP PVQYSKPSRN
201: DRNRNCRGNY ENSPPPQGNY QNRSPPQGNF QGSRPQQDVR GYAPQQNYAQ AGQDGRGYGR NDSADHPGYN APGGYQGRVN EAGQGFQDPQ ERRSFSQGQE
301: GDLRPGGPSA PGNYGQPPAP GNYGQPPAPG NYGQPPAPGN YGQPPAPGSY GKPSGPPAYG QPSGSRYPGG NQGGPGYGGD NRQGAAPAYG GDNLQGVSGQ
401: YPSPGEGQQG NWQGRQ

Best Arabidopsis Sequence Match ( AT4G20020.1 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQV
401: RSRSIMNLAS FFFDILIRH

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.