Factsheet for TraesCS4B01G107700.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G104800.2	Wheat	mitochondrion	94.0	97.84
TraesCS4A01G203900.1	Wheat	nucleus	91.92	96.14
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	91.45	92.09
Zm00001d049043_P001	Maize	mitochondrion	70.9	74.88
Os11t0216400-01	Rice	mitochondrion	63.74	73.8
EES08356	Sorghum	mitochondrion	75.06	72.54
GSMUA_Achr1P22060_001	Banana	mitochondrion	47.81	53.08
VIT_12s0035g00240.t01	Wine grape	mitochondrion	39.72	42.68
TraesCS7B01G207300.1	Wheat	plastid	21.71	41.23
CDX78969	Canola	mitochondrion	32.79	37.08
Bra013439.1-P	Field mustard	mitochondrion	32.79	36.88
CDY50054	Canola	mitochondrion	32.33	36.84
CDX98651	Canola	mitochondrion	27.02	36.22
Bra012522.1-P	Field mustard	mitochondrion, plastid	31.64	35.31
CDY01629	Canola	mitochondrion	31.64	34.86
TraesCS2B01G457700.1	Wheat	plastid	16.63	33.64
Solyc02g079210.2.1	Tomato	plastid	35.57	33.48
PGSC0003DMT400057561	Potato	mitochondrion, plastid	35.8	32.98
AT4G20020.1	Thale cress	mitochondrion	31.18	32.22
KRH44085	Soybean	mitochondrion, plastid	33.72	31.6
KRH26355	Soybean	mitochondrion	33.49	31.39
TraesCS6B01G010000.1	Wheat	plastid	18.01	31.08
TraesCS6B01G344700.2	Wheat	mitochondrion	17.55	30.04
TraesCS5B01G289900.1	Wheat	nucleus	22.17	23.82
TraesCS5B01G290000.1	Wheat	mitochondrion, plastid	18.48	23.74
TraesCS7B01G160200.1	Wheat	mitochondrion	21.02	21.88
AT5G44780.1	Thale cress	mitochondrion	32.56	19.5
CDY60655	Canola	plastid	32.1	19.25
Bra025105.1-P	Field mustard	mitochondrion	31.87	18.83

Protein Annotations

EnsemblPlants:TraesCS4B01G107700.2	EnsemblPlantsGene:TraesCS4B01G107700	ncoils:Coil	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	SEG:seg
MapMan:16.12.5.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:117383140..117386553

Molecular Weight (calculated)

46239.0 Da

IEP (calculated)

8.586

GRAVY (calculated)

-0.998

Length

433 amino acids

Sequence
(BLAST)

001: MALALRLRRA LAAASTSASL LRPTASAAAP PHRAPLLAPF VAPLPRPFLP GGAAGFRSTA ATAARGNYGG GADDAKIDPD EILFEGCDYN HWLITMEFPD
101: PKPSREEMIE TYLQTLAKVV GSYEEAKKRM YALSTTTYVG FQAVMTEEMS EKFRGLPGVV FILPDSYLYP ETKEYGGDKY ENGVITPRPP PVQYSKLSRN
201: DRNRNYRGNY ENSPPPQGNY QNSPPHGNYQ NRSPQGNFQG SRPQQDVRGY APQQNYTQAG QDGRGYGRND SADRPGYNAP GGYQGRVNEA GQGFQDPQER
301: RSFSQGQEGD LRPGGPSAPG NYGQPPAPGN YGQPPAPGNY GQPPAPGNYG QPPAPGNYGQ PPAPGSYGKP SEPPAYGQPS GSRYPGGNQG APGYGGDNRQ
401: GAAPAYGGDN LQGVSGQYPS PGEGQQGNWQ GRQ

Best Arabidopsis Sequence Match ( AT4G20020.2 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQF
401: PQGRRY

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.