CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
peroxisome 1
nucleus 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 27780359

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44085	Soybean	mitochondrion, plastid	88.74	88.74
VIT_12s0035g00240.t01	Wine grape	mitochondrion	38.74	44.42
CDX98651	Canola	mitochondrion	29.0	41.49
KRH21628	Soybean	nucleus, plastid	19.7	40.44
KRH10700	Soybean	nucleus, plastid	18.83	39.19
CDY50054	Canola	mitochondrion	32.03	38.95
Bra012522.1-P	Field mustard	mitochondrion, plastid	32.47	38.66
CDY01629	Canola	mitochondrion	32.68	38.42
CDX78969	Canola	mitochondrion	31.82	38.38
Bra013439.1-P	Field mustard	mitochondrion	31.6	37.92
Solyc02g079210.2.1	Tomato	plastid	37.01	37.17
PGSC0003DMT400057561	Potato	mitochondrion, plastid	37.01	36.38
Os11t0216400-01	Rice	mitochondrion	28.57	35.29
AT4G20020.1	Thale cress	mitochondrion	31.39	34.61
TraesCS4A01G203900.1	Wheat	nucleus	30.95	34.54
TraesCS4D01G104800.2	Wheat	mitochondrion	30.95	34.38
GSMUA_Achr1P22060_001	Banana	mitochondrion	29.0	34.36
HORVU4Hr1G016440.1	Barley	mitochondrion, plastid	31.82	34.19
KRG92352	Soybean	mitochondrion, plastid	17.32	33.76
TraesCS4B01G107700.2	Wheat	mitochondrion	31.39	33.49
Zm00001d049043_P001	Maize	mitochondrion	29.65	33.41
KRH02286	Soybean	mitochondrion	17.75	33.2
KRH50805	Soybean	mitochondrion	17.53	32.53
KRH31686	Soybean	mitochondrion	14.94	30.94
EES08356	Sorghum	mitochondrion	29.22	30.13
KRH34443	Soybean	plastid	16.67	29.17
KRH21995	Soybean	plastid	21.64	24.94
KRH27318	Soybean	nucleus	19.26	24.52
AT5G44780.1	Thale cress	mitochondrion	34.85	22.27
CDY60655	Canola	plastid	32.9	21.05
Bra025105.1-P	Field mustard	mitochondrion	32.47	20.46

Protein Annotations

EMBL:ACUP02007708	EnsemblPlants:KRH26355	EnsemblPlantsGene:GLYMA_12G169200	EntrezGene:100807195	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016554	PANTHER:PTHR31346	PANTHER:PTHR31346:SF5	ProteinID:KRH26355
ProteinID:KRH26355.1	ProteinID:KRH26356.1	SEG:seg	UniParc:UPI00023D115E	UniProt:I1LTF0	MapMan:16.12.5.1

Description

hypothetical protein

Coordinates

chr12:-:32422652..32426033

Molecular Weight (calculated)

51842.4 Da

IEP (calculated)

8.967

GRAVY (calculated)

-1.149

Length

462 amino acids

Sequence
(BLAST)

001: MASSLIHLRR TVRALSGVAQ SFSVHAASYS VPIRCGVSWS LQSPKGVVQP RSFRSSSISL LSFRSSQRQS NIPDEIGPDT ILFEGCDYNH WLIVMEFKDK
101: DNKPSPEDMV RVYEETCAKG LNISLEEAKK KIYACSTTTY IGFQAVMTEE ESKKFEGLPG VIFVLPDSYI DPVNKQYGGD QYINGTIIPR PPPVQFGRNQ
201: GRRDWNRSPG QYNRQENPVP SPQGNPSYNS QGPMPRGGRN YGPSQNYPPQ QNSGQASQNY PPQQNYGPAS QNYPPQQNFV RASQNYPPQQ NYGQASQNYP
301: PQQNYGQASQ NYPPQQNFGQ ASQNYPPQQN YGQAPQNYPP QQNFDQASQN YPQQQRYGPS SPQYAQQQSF GPPGQGERRN YMPQQNIGRP GQGERRDPVP
401: RHGASEARGD TFTPSYVQDF KSAYKEEFEQ AELGNHPAKE QTGSQQRYPP SGPGTFTGEG RY

Best Arabidopsis Sequence Match ( AT4G20020.2 )
(BLAST)

001: MAMISHRLRR ALLTATSYVN RSISSSITPA SDFPSVSAAV LKRSVIGRST EVATRAPARL FSTRQYKLYK EGDEITEDTV LFEGCDYNHW LITMDFSKEE
101: TPKSPEEMVA AYEETCAQGL GISVEEAKQR MYACSTTTYQ GFQAIMTEQE SEKFKDLPGV VFILPDSYID PQNKEYGGDK YENGVITHRP PPIQSGRARP
201: RPRFDRSGGG SGGPQNFQRN TQYGQQPPMQ GGGGSYGPQQ GYATPGQGQG TQAPPPFQGG YNQGPRSPPP PYQAGYNQGQ GSPVPPYQAG YNQVQGSPVP
301: PYQGTQSSYG QGGSGNYSQG PQGGYNQGGP RNYNPQGAGN FGPASGAGNL GPAPGAGNPG YGQGYSGPGQ EQNQTFPQAD QRNRDWNNNN PAGQPGSDQF
401: PQGRRY

Arabidopsis Description

MORF1Multiple organellar RNA editing factor 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O49429]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.