CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91356
KRH13399
KRH16959
KRH20755
KRH24006
KRH24392
KRH27971
KRH29310
KRH29374
KRH31661
KRH35470
KRH51475
KRH53667
KRH60786
KRH62918
KRH64261
KRH69115
KRH77487

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32580.1	KRH24006	AT3G48150.1	21798944
AT1G32580.1	KRH27971	AT3G48150.1	21798944
AT1G32580.1	KRH29310	AT3G48150.1	21798944
AT1G32580.1	KRH77487	AT3G48150.1	21798944
AT1G32580.1	KRH16959	AT3G49580.1	21798944
AT1G32580.1	KRH53667	AT3G49580.1	21798944
AT1G32580.1	KRH64261	AT3G49580.1	21798944
AT2G35240.1	KRH16959	AT3G49580.1	21798944
AT2G35240.1	KRH53667	AT3G49580.1	21798944
AT2G35240.1	KRH64261	AT3G49580.1	21798944
AT2G35240.1	KRG91356	AT4G14740.1	21798944
AT2G35240.1	KRH31661	AT4G14740.1	21798944
AT2G35240.1	KRH35470	AT4G14740.1	21798944
AT2G35240.1	KRH69115	AT4G14740.1	21798944
AT2G35240.1	KRH24392	AT4G39050.1	21798944
AT2G35240.1	KRH29374	AT4G39050.1	21798944
AT2G35240.1	KRH51475	AT4G39050.1	21798944
AT2G35240.1	KRH60786	AT4G39050.1	21798944
AT2G35240.1	KRH13399	AT5G13810.1	21798944
AT2G35240.1	KRH20755	AT5G13810.1	21798944
AT2G35240.1	KRH62918	AT5G13810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92352	Soybean	mitochondrion, plastid	85.61	95.36
Os06t0116600-01	Rice	mitochondrion	54.55	87.27
HORVU0Hr1G032330.2	Barley	cytosol	35.98	87.16
GSMUA_Achr6P01260_001	Banana	cytosol	48.48	87.07
CDX79529	Canola	cytosol	39.77	86.78
GSMUA_Achr4P27580_001	Banana	cytosol	47.73	85.71
CDY37719	Canola	plastid	62.88	74.77
Bra021852.1-P	Field mustard	plastid	62.5	74.32
CDY23734	Canola	plastid	64.02	74.12
CDY17174	Canola	plastid	64.02	73.48
Bra005495.1-P	Field mustard	plastid	64.02	73.48
CDY19491	Canola	plastid	63.64	72.73
Zm00001d026243_P002	Maize	extracellular	59.09	71.89
KRH31686	Soybean	mitochondrion	60.61	71.75
TraesCS2D01G434600.1	Wheat	plastid	58.33	71.63
PGSC0003DMT400038117	Potato	plastid	62.5	71.43
EES11377	Sorghum	mitochondrion, plastid	58.33	71.3
TraesCS2A01G437600.1	Wheat	plastid	57.58	71.03
TraesCS2B01G457700.1	Wheat	plastid	57.2	70.56
Solyc06g008220.2.1	Tomato	plastid	63.64	70.29
VIT_07s0005g03930.t01	Wine grape	mitochondrion, plastid	61.74	69.07
Zm00001d045528_P001	Maize	mitochondrion	58.33	69.06
TraesCS7D01G045100.1	Wheat	mitochondrion, plastid	60.61	68.97
TraesCS4A01G437100.1	Wheat	mitochondrion	60.98	68.51
EER87743	Sorghum	mitochondrion	57.2	68.02
AT1G32580.1	Thale cress	mitochondrion, plastid	58.71	67.69
TraesCS7A01G050200.1	Wheat	mitochondrion	60.23	67.37
HORVU7Hr1G008880.2	Barley	plastid	60.98	67.08
AT2G35240.1	Thale cress	mitochondrion, plastid	57.95	65.95
GSMUA_Achr2P17930_001	Banana	mitochondrion, plastid	61.74	62.93
TraesCS6D01G007100.1	Wheat	mitochondrion	56.82	62.24
HORVU5Hr1G072150.9	Barley	mitochondrion	39.77	61.05
TraesCS6A01G005300.1	Wheat	plastid	57.2	60.4
TraesCS6B01G010000.1	Wheat	plastid	57.2	60.16
HORVU6Hr1G002030.1	Barley	plastid	58.33	59.92
HORVU1Hr1G057120.1	Barley	plastid	29.55	50.98
TraesCS3A01G476100.2	Wheat	plastid	31.82	47.19
HORVU2Hr1G040170.17	Barley	mitochondrion	38.26	37.0
KRH02286	Soybean	mitochondrion	34.09	36.44
KRH21628	Soybean	nucleus, plastid	30.68	36.0
KRH50805	Soybean	mitochondrion	33.71	35.74
KRH10700	Soybean	nucleus, plastid	29.17	34.68
KRH27318	Soybean	nucleus	33.71	24.52
KRH21995	Soybean	plastid	33.33	21.95
KRH26355	Soybean	mitochondrion	29.17	16.67
KRH44085	Soybean	mitochondrion, plastid	27.65	15.8

Protein Annotations

EMBL:ACUP02006599	EnsemblPlants:KRH34443	EnsemblPlantsGene:GLYMA_10G183800	EntrezGene:100795099	GO:GO:0005575	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016554
PANTHER:PTHR31346	PANTHER:PTHR31346:SF7	ProteinID:KRH34443	ProteinID:KRH34443.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI00023CDEB8	UniProt:I1LC87	MapMan:16.12.5.1	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:41700028..41702137

Molecular Weight (calculated)

29655.1 Da

IEP (calculated)

7.698

GRAVY (calculated)

-0.389

Length

264 amino acids

Sequence
(BLAST)

001: MARAVSSSCA RLTMRLFSTT TTTTTTTAAF AVTLPKPSSL SVSTRRFLFP LSHAIVPPST RVAGIRCRVN RAGDSAYSPL NSASSSSSSF SDRPPTEMAP
101: LFPGCDYNHW LIVMDHPGGE GATKQQMIDC YIQTLAKVLG SEEEAKKKIY NVSCERYFGF GCEIDEETSN KLEGMFSEVE VFEISFLCSL FFICVGLPGV
201: LFVLPDSYVD PENKDYGAEL FVNGEIVQRS PERQRRVEPQ PQRHQDRPRY NDRTRYVRRR ENTQ

Best Arabidopsis Sequence Match ( AT1G32580.1 )
(BLAST)

001: MAKTLARSTA SRITKRLIST SGATTPSPSY ILSRRSTPVF SHAVGFISSL NRFTTIRTRM DRSGGSYSPL KSGSNFSDRA PTEMAPLFPG CDYEHWLIVM
101: DKPGGENATK QQMIDCYVQT LAKIIGSEEE AKKKIYNVSC ERYFGFGCEI DEETSNKLEG LPGVLFILPD SYVDQENKDY GAELFVNGEI VQRPPERQRK
201: IIELTTQRTN DKPKYHDKTR YVRRRENMR

Arabidopsis Description

MORF5Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9C7Y2]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.