CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91356	Soybean	cytosol	95.17	95.17
VIT_05s0020g04020.t01	Wine grape	nucleus	80.25	82.86
KRH31661	Soybean	nucleus	81.09	79.92
KRH69115	Soybean	nucleus	81.09	79.42
PGSC0003DMT400016521	Potato	nucleus	74.37	75.97
Solyc09g082580.2.1	Tomato	cytosol	74.16	75.91
CDY50683	Canola	cytosol, endoplasmic reticulum, nucleus	72.27	73.98
Bra036892.1-P	Field mustard	nucleus	72.48	73.72
CDY36869	Canola	nucleus, plastid	26.89	73.56
Bra039719.1-P	Field mustard	nucleus	71.85	73.55
CDY29764	Canola	nucleus	68.07	73.14
AT4G14740.1	Thale cress	cytosol, endoplasmic reticulum, nucleus	72.48	72.63
AT3G22810.1	Thale cress	cytosol	70.59	71.19
CDY16256	Canola	cytosol	59.66	71.0
KRH67258	Soybean	nucleus	56.3	70.16
Bra033702.1-P	Field mustard	cytosol, plastid	61.97	69.41
GSMUA_Achr5P02990_001	Banana	nucleus	65.76	68.94
GSMUA_Achr4P21170_001	Banana	cytosol	52.52	68.12
CDY22328	Canola	plastid	64.08	67.63
GSMUA_Achr7P07730_001	Banana	nucleus	63.03	67.42
GSMUA_AchrUn_...	Banana	nucleus	64.08	67.18
CDX94730	Canola	cytosol	62.82	66.59
Bra023803.1-P	Field mustard	cytosol	64.29	66.52
AT5G43870.1	Thale cress	plastid	63.24	66.45
CDY14898	Canola	cytosol	62.6	66.08
Bra036001.1-P	Field mustard	nucleus	62.4	65.85
CDY36868	Canola	nucleus	31.72	65.65
TraesCS5A01G377600.1	Wheat	nucleus	63.03	65.36
HORVU5Hr1G093460.2	Barley	nucleus	63.45	65.09
TraesCS5B01G381200.1	Wheat	nucleus	63.24	64.87
TraesCS5D01G387600.1	Wheat	nucleus	63.03	64.79
KRG95576	Soybean	nucleus	65.76	64.54
KRH32056	Soybean	nucleus	64.92	64.24
KRH71381	Soybean	nucleus	64.29	63.62
CDY46598	Canola	mitochondrion	64.5	63.56
Zm00001d033283_P001	Maize	cytosol	62.6	63.14
Zm00001d013705_P001	Maize	cytosol, nucleus, peroxisome	62.18	63.11
KXG37970	Sorghum	cytosol	62.4	63.06
GSMUA_Achr4P21160_001	Banana	cytosol	12.39	60.82
TraesCS5A01G056700.2	Wheat	nucleus	59.87	60.51
OQU79534	Sorghum	cytosol, mitochondrion, nucleus	61.97	60.45
TraesCS5D01G067900.2	Wheat	nucleus	59.66	60.43
TraesCS5B01G060100.2	Wheat	nucleus	59.45	60.34
Os03t0635800-01	Rice	nucleus	47.69	60.05
CDX96925	Canola	plastid	61.76	60.0
Zm00001d030661_P001	Maize	cytosol	58.19	59.96
Os12t0604200-00	Rice	nucleus	46.43	59.57
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	36.34	41.89
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	35.92	40.43
KRH28119	Soybean	nucleus	30.46	37.08
KRH77342	Soybean	cytosol, endoplasmic reticulum, nucleus	29.41	35.81
KRH04152	Soybean	nucleus	28.99	35.11
KRH57434	Soybean	nucleus	28.99	35.03
KRH02952	Soybean	cytosol	25.84	32.03
KRH18946	Soybean	nucleus	25.63	31.52

Protein Annotations

EMBL:ACUP02006680	EnsemblPlants:KRH35470	EnsemblPlantsGene:GLYMA_10G244600	EntrezGene:100815538	InterPro:DUF828	InterPro:PH_pln
PANTHER:PTHR31351	PANTHER:PTHR31351:SF16	PFAM:PF05703	PFAM:PF08458	ProteinID:KRH35470	ProteinID:KRH35470.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000233C956	UniProt:I1LE17	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr10:-:47316038..47319154

Molecular Weight (calculated)

50810.3 Da

IEP (calculated)

9.832

GRAVY (calculated)

-0.295

Length

476 amino acids

Sequence
(BLAST)

001: MDKAQTEPWR PDPFHSGIFR PPETPREPME FLSRSWSVSA HEVSKALSPA LSKVTLSNGT AAVVAIPEDI AGEAEESSAT VSGNPFSFAS SETSQMVMER
101: IMSQSQEVSP RTSGRLSHSS GPLNGTQSCG SLTDSPPVSP SEIDDIKYTR ANNIASSLSL NFRTTATAAA PGGGKTVGRW LKDRKEKKKE ETRAHNAQLH
201: AAVSVAGVAA AIAAIAAATA ATSGAGKDEQ MAKTDMAVAS AATLVAAQCV EAAEALGAER EHLASVVSSS VNVRSAGDIM TLTAAAATAL RGAATLKARA
301: LKEVWNIAAV IPVEKNLAVA GGHNNNNNAS NGNSKSSFSG ELVPEENFLG ICSRELLARG CELLKRTRKG DLHWKVVSVY VNRMNQVILK MKSRHVAGTI
401: TKKKKNVVLE VIKDVPAWPG RHLLEGGEDR RYFGLKTVMR GLVEFECRNQ REYDVWTQGV SRLLSIAAEK NNKNRI

Best Arabidopsis Sequence Match ( AT3G22810.1 )
(BLAST)

001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI

Arabidopsis Description

Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.