Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29764 | Canola | nucleus | 94.66 | 100.0 |
| Bra039719.1-P | Field mustard | nucleus | 92.73 | 93.33 |
| AT4G14740.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 93.8 | 92.42 |
| Bra023803.1-P | Field mustard | cytosol | 74.57 | 75.87 |
| VIT_05s0020g04020.t01 | Wine grape | nucleus | 72.22 | 73.32 |
| KRG91356 | Soybean | cytosol | 74.15 | 72.9 |
| KRH35470 | Soybean | nucleus | 73.72 | 72.48 |
| PGSC0003DMT400016521 | Potato | nucleus | 71.37 | 71.67 |
| Solyc09g082580.2.1 | Tomato | cytosol | 70.94 | 71.4 |
| KRH31661 | Soybean | nucleus | 72.22 | 69.98 |
| KRH69115 | Soybean | nucleus | 72.65 | 69.96 |
| Bra033702.1-P | Field mustard | cytosol, plastid | 61.32 | 67.53 |
| GSMUA_Achr5P02990_001 | Banana | nucleus | 63.25 | 65.2 |
| GSMUA_Achr4P21170_001 | Banana | cytosol | 51.07 | 65.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 62.61 | 64.54 |
| GSMUA_Achr7P07730_001 | Banana | nucleus | 60.9 | 64.04 |
| Bra036001.1-P | Field mustard | nucleus | 61.11 | 63.41 |
| TraesCS5A01G377600.1 | Wheat | nucleus | 60.26 | 61.44 |
| TraesCS5B01G381200.1 | Wheat | nucleus | 60.68 | 61.21 |
| TraesCS5D01G387600.1 | Wheat | nucleus | 60.47 | 61.12 |
| HORVU5Hr1G093460.2 | Barley | nucleus | 60.47 | 60.99 |
| Zm00001d013705_P001 | Maize | cytosol, nucleus, peroxisome | 60.26 | 60.13 |
| Zm00001d033283_P001 | Maize | cytosol | 60.04 | 59.53 |
| KXG37970 | Sorghum | cytosol | 59.83 | 59.45 |
| Bra040444.1-P | Field mustard | plastid | 61.11 | 58.85 |
| TraesCS5A01G056700.2 | Wheat | nucleus | 57.91 | 57.54 |
| TraesCS5D01G067900.2 | Wheat | nucleus | 57.69 | 57.45 |
| Os03t0635800-01 | Rice | nucleus | 46.37 | 57.41 |
| OQU79534 | Sorghum | cytosol, mitochondrion, nucleus | 59.83 | 57.38 |
| TraesCS5B01G060100.2 | Wheat | nucleus | 57.48 | 57.36 |
| Zm00001d030661_P001 | Maize | cytosol | 55.98 | 56.71 |
| Os12t0604200-00 | Rice | nucleus | 44.23 | 55.8 |
| GSMUA_Achr4P21160_001 | Banana | cytosol | 11.11 | 53.61 |
| Bra011382.1-P | Field mustard | cytosol | 34.62 | 37.94 |
| Bra026246.1-P | Field mustard | nucleus | 29.7 | 34.49 |
| Bra024944.1-P | Field mustard | cytosol | 27.56 | 31.85 |
| Bra038497.1-P | Field mustard | nucleus | 26.92 | 29.23 |
| Bra020413.1-P | Field mustard | cytosol | 25.21 | 28.57 |
| Bra002698.1-P | Field mustard | cytosol | 24.36 | 27.94 |
Protein Annotations
Description
AT4G14740 (E=4e-168) | phosphoinositide binding
Coordinates
chrA01:+:12318327..12321735
Molecular Weight (calculated)
50561.2 Da
IEP (calculated)
9.241
GRAVY (calculated)
-0.369
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKPMVPTWR PDPVYRPPET PLEPMEFLAR SWSVSALEVS KALTPSNPQI LLSKTEEEPI SGDGGDTEEN GLVSGNTFSF ACSETSQMVM DRILSHSQEV
101: SPRTSGRLSH SSGPLNGSLT DSPPVSPPES DDIKQFCRAN NTSLNNINSQ FRSTATTPGP ITATATQSKT VGRWLKDRRE KKKEETRAHN AQIHAAVSVA
201: GVAAAVAAIA AATAASSSSG KDEQMAKTDM AVASAATLVA AQCVEAAELM GAEREHLASV VSSAVNVRSA GDIMTLTAGA ATALRGVATL KARAMKEVWN
301: IASVIPMDKG LTSTGGCSNV HNGSNGSSSS SHSGELMQQE NFLGTCSREW LARGCELLKR TRKGDLHWKI VSVYINKMNQ VTLKMKSKHV GKTFTKKKKN
401: IVLEVIKNVP AWPGRHLLEG GDDLRYFGLK TVLRGDVEFE CKSQREYDMW TQGVSRLLVV AAERRFRM
101: SPRTSGRLSH SSGPLNGSLT DSPPVSPPES DDIKQFCRAN NTSLNNINSQ FRSTATTPGP ITATATQSKT VGRWLKDRRE KKKEETRAHN AQIHAAVSVA
201: GVAAAVAAIA AATAASSSSG KDEQMAKTDM AVASAATLVA AQCVEAAELM GAEREHLASV VSSAVNVRSA GDIMTLTAGA ATALRGVATL KARAMKEVWN
301: IASVIPMDKG LTSTGGCSNV HNGSNGSSSS SHSGELMQQE NFLGTCSREW LARGCELLKR TRKGDLHWKI VSVYINKMNQ VTLKMKSKHV GKTFTKKKKN
401: IVLEVIKNVP AWPGRHLLEG GDDLRYFGLK TVLRGDVEFE CKSQREYDMW TQGVSRLLVV AAERRFRM
001: MEKLMVPTWR PDPVYRPPET PLEPMEFLAR SWSVSALEVS KALTPPNPQI LLSKTEEEEE EEPISSVVDG DGDTEDTGLV TGNPFSFACS ETSQMVMDRI
101: LSHSQEVSPR TSGRLSHSSG PLNGSLTDSP PVSPPESDDI KQFCRANKNS LNSVNSQFRS TAATPGPITA TATQSKTVGR WLKDRREKKK EETRAHNAQI
201: HAAVSVAGVA AAVAAIAAAT AASSSCGKDE QMAKTDMAVA SAATLVAAQC VEAAEVMGAE REYLASVVSS AVNVRSAGDI MTLTAGAATA LRGVQTLKAR
301: AMKEVWNIAS VIPMDKGLTS TGGSSNNVNG SNGSSSSSHS GELVQQENFL GTCSREWLAR GCELLKRTRK GDLHWKIVSV YINKMNQVML KMKSRHVGGT
401: FTKKKKNIVL DVIKNVPAWP GRHLLEGGDD LRYFGLKTVM RGDVEFEVKS QREYEMWTQG VSRLLVLAAE RKFRM
101: LSHSQEVSPR TSGRLSHSSG PLNGSLTDSP PVSPPESDDI KQFCRANKNS LNSVNSQFRS TAATPGPITA TATQSKTVGR WLKDRREKKK EETRAHNAQI
201: HAAVSVAGVA AAVAAIAAAT AASSSCGKDE QMAKTDMAVA SAATLVAAQC VEAAEVMGAE REYLASVVSS AVNVRSAGDI MTLTAGAATA LRGVQTLKAR
301: AMKEVWNIAS VIPMDKGLTS TGGSSNNVNG SNGSSSSSHS GELVQQENFL GTCSREWLAR GCELLKRTRK GDLHWKIVSV YINKMNQVML KMKSRHVGGT
401: FTKKKKNIVL DVIKNVPAWP GRHLLEGGDD LRYFGLKTVM RGDVEFEVKS QREYEMWTQG VSRLLVLAAE RKFRM
Arabidopsis Description
Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q8VY20]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.