Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d004245_P003
Zm00001d009353_P001
Zm00001d015278_P001
Zm00001d015981_P001
Zm00001d021087_P003
Zm00001d023982_P001
Zm00001d031667_P006
Zm00001d049871_P001
Zm00001d049872_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G63300.1 Zm00001d004245_P003 AT5G13300.1 19363154
AT3G63300.1 Zm00001d009353_P001 AT5G13300.1 19363154
AT3G63300.1 Zm00001d015278_P001 AT5G13300.1 19363154
AT3G63300.1 Zm00001d015981_P001 AT5G13300.1 19363154
AT3G63300.1 Zm00001d021087_P003 AT5G13300.1 19363154
AT3G63300.1 Zm00001d023982_P001 AT5G13300.1 19363154
AT3G63300.1 Zm00001d031667_P006 AT5G13300.1 19363154
AT3G63300.1 Zm00001d049871_P001 AT5G13300.1 19363154
AT3G63300.1 Zm00001d049872_P001 AT5G13300.1 19363154
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU79534 Sorghum cytosol, mitochondrion, nucleus 86.58 81.97
TraesCS5A01G056700.2 Wheat nucleus 73.81 72.4
Zm00001d013705_P001 Maize cytosol, nucleus, peroxisome 73.38 72.28
TraesCS5D01G067900.2 Wheat nucleus 73.38 72.13
TraesCS5B01G060100.2 Wheat nucleus 73.16 72.07
Zm00001d033283_P001 Maize cytosol 73.16 71.61
GSMUA_AchrUn_... Banana nucleus 64.72 65.86
GSMUA_Achr5P02990_001 Banana nucleus 64.72 65.86
GSMUA_Achr4P21170_001 Banana cytosol 51.73 65.12
GSMUA_Achr7P07730_001 Banana nucleus 61.26 63.6
GSMUA_Achr4P21160_001 Banana cytosol 13.2 62.89
VIT_05s0020g04020.t01 Wine grape nucleus 61.04 61.17
KRH67258 Soybean nucleus 49.13 59.42
KRH35470 Soybean nucleus 59.96 58.19
KRG91356 Soybean cytosol 59.96 58.19
Solyc09g082580.2.1 Tomato cytosol 57.58 57.2
KRH69115 Soybean nucleus 60.17 57.2
PGSC0003DMT400016521 Potato nucleus 57.58 57.08
KRH31661 Soybean nucleus 59.52 56.94
CDY29764 Canola nucleus 54.11 56.43
Bra036892.1-P Field mustard nucleus 56.71 55.98
VIT_07s0151g00290.t01 Wine grape nucleus 57.79 55.86
Bra033702.1-P Field mustard cytosol, plastid 51.3 55.76
CDY36869 Canola nucleus, plastid 21.0 55.75
CDY50683 Canola cytosol, endoplasmic reticulum, nucleus 55.63 55.27
AT4G14740.1 Thale cress cytosol, endoplasmic reticulum, nucleus 56.71 55.16
Bra039719.1-P Field mustard nucleus 55.41 55.05
AT3G22810.1 Thale cress cytosol 56.06 54.87
KRH32056 Soybean nucleus 56.93 54.68
CDY16256 Canola cytosol 47.19 54.5
CDY22328 Canola plastid 53.03 54.32
KRG95576 Soybean nucleus 56.93 54.23
CDX94730 Canola cytosol 52.6 54.12
KRH71381 Soybean nucleus 56.28 54.05
CDY14898 Canola cytosol 52.16 53.44
Bra036001.1-P Field mustard nucleus 51.95 53.22
AT5G43870.1 Thale cress plastid 52.16 53.2
Bra040444.1-P Field mustard plastid 55.19 52.47
CDX93914 Canola nucleus 55.63 52.34
PGSC0003DMT400049811 Potato plastid 54.55 52.17
Solyc09g065590.2.1 Tomato plastid 54.98 52.16
CDY53717 Canola nucleus 55.41 52.14
Bra023803.1-P Field mustard cytosol 51.73 51.96
AT3G63300.1 Thale cress plastid 55.63 51.61
CDY46598 Canola mitochondrion 51.73 49.48
CDY36868 Canola nucleus 24.46 49.13
CDX96925 Canola plastid 51.95 48.98
Zm00001d039295_P001 Maize cytosol 34.63 38.93
Zm00001d000175_P001 Maize plastid 31.17 36.27
Zm00001d051361_P001 Maize plastid 32.47 34.97
Zm00001d029886_P001 Maize vacuole 29.65 34.6
Zm00001d003160_P001 Maize cytosol 25.11 28.71
Zm00001d025771_P001 Maize cytosol 24.03 26.0
Protein Annotations
EnsemblPlants:Zm00001d030661_P001EnsemblPlants:Zm00001d030661_T001EnsemblPlantsGene:Zm00001d030661EntrezGene:103639593InterPro:DUF828InterPro:PH_pln
PANTHER:PTHR31351PANTHER:PTHR31351:SF4PFAM:PF05703PFAM:PF08458ProteinID:ONM01277.1SEG:seg
UniParc:UPI0004DE7E9BUniProt:A0A1D6KDG9MapMan:35.1:::
Description
VAN3-binding protein
Coordinates
chr1:+:151627586..151634045
Molecular Weight (calculated)
48477.5 Da
IEP (calculated)
9.955
GRAVY (calculated)
-0.237
Length
462 amino acids
Sequence
(BLAST)
001: MTDAGAARAR RPGGGGDGDL PLRPPEPPRD PLEFLSRSWS VSSSAADDVS RALAPALASG AAIAEDVAGE LDAASGSSFS FASAATSQLV LDRIMAPTSV
101: EVAPLTSGRL SHSSGPLNCG GSLSDSPPVS PEIDDTKFCR AVSLSTPKPQ PYARGGSKTV GRWLKDRRER RKEEARAHNA QVHAAVSVAA VAAAIAAVAA
201: GKGARTDMAV ASAATLVAAQ CVEAAEALGA EREQLAAAVA SAVSVRTPSD VATVTAAAAT ALRGAATLRA RALKEAWNVA AVTPVEKGAM TGGGGHHLHG
301: GGYKHDGQQQ RQRLLREVES SNSSSSCLSD ELVLGEENNF LGICTQELLA RGTELLKRTR KGSLHWKVVS VYINRAGLVM LKMKSRHVGG TITKKKKSVV
401: VDVCRDVAAW PGRHLLDSGE HRRYFGLRTA EQRVIEFECG SQREHEVWTK GVARLLADAR KR
Best Arabidopsis Sequence Match ( AT3G22810.1 )
(BLAST)
001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI
Arabidopsis Description
Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.