Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22065420
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94492 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 89.17 | 86.13 |
| Zm00001d029886_P001 | Maize | vacuole | 78.09 | 78.28 |
| Os10t0560000-01 | Rice | cytosol | 71.03 | 74.41 |
| TraesCS1B01G234200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 69.02 | 71.35 |
| TraesCS1A01G220700.1 | Wheat | cytosol | 68.51 | 70.83 |
| HORVU1Hr1G056150.4 | Barley | cytosol, nucleus | 67.51 | 69.97 |
| TraesCS3A01G147100.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 67.25 | 69.35 |
| TraesCS1D01G222200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 68.77 | 65.78 |
| GSMUA_Achr8P11040_001 | Banana | cytosol | 50.13 | 59.4 |
| GSMUA_Achr11P... | Banana | nucleus | 54.16 | 54.29 |
| Zm00001d051361_P001 | Maize | plastid | 51.39 | 47.55 |
| AT4G17350.1 | Thale cress | cytosol | 44.08 | 43.21 |
| CDY65120 | Canola | cytosol | 43.83 | 43.18 |
| CDY64500 | Canola | cytosol | 43.58 | 42.93 |
| Bra026246.1-P | Field mustard | nucleus | 43.58 | 42.93 |
| CDY09634 | Canola | nucleus | 44.08 | 42.79 |
| Solyc08g078500.2.1 | Tomato | cytosol | 41.06 | 41.79 |
| PGSC0003DMT400012161 | Potato | nucleus | 40.81 | 41.54 |
| KRH04152 | Soybean | nucleus | 41.06 | 41.48 |
| KRH28119 | Soybean | nucleus | 40.3 | 40.92 |
| KRH57434 | Soybean | nucleus | 40.05 | 40.36 |
| AT5G47440.1 | Thale cress | nucleus | 40.3 | 39.41 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 38.79 | 39.39 |
| CDX77767 | Canola | nucleus | 39.29 | 38.42 |
| Bra024944.1-P | Field mustard | cytosol | 39.04 | 38.27 |
| CDY59298 | Canola | nucleus | 38.54 | 37.68 |
| CDY40515 | Canola | cytosol | 38.79 | 35.08 |
| AT4G16670.1 | Thale cress | cytosol | 37.78 | 34.97 |
| CDY32269 | Canola | cytosol | 33.25 | 34.92 |
| Bra038497.1-P | Field mustard | nucleus | 37.28 | 34.34 |
| Zm00001d039295_P001 | Maize | cytosol | 34.01 | 32.85 |
| Zm00001d030661_P001 | Maize | cytosol | 36.27 | 31.17 |
| Zm00001d033283_P001 | Maize | cytosol | 36.02 | 30.3 |
| Zm00001d013705_P001 | Maize | cytosol, nucleus, peroxisome | 35.77 | 30.28 |
| Zm00001d003160_P001 | Maize | cytosol | 25.69 | 25.25 |
| Zm00001d025771_P001 | Maize | cytosol | 24.18 | 22.48 |
Protein Annotations
| EnsemblPlants:Zm00001d000175_P001 | EnsemblPlants:Zm00001d000175_T001 | EnsemblPlantsGene:Zm00001d000175 | EntrezGene:103638937 | InterPro:DUF828 | InterPro:PH_pln |
| PANTHER:PTHR31351 | PANTHER:PTHR31351:SF5 | PFAM:PF05703 | PFAM:PF08458 | SEG:seg | UniParc:UPI0004DEBE72 |
| UniProt:A0A1X7YFW4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrB73V4_ctg181:+:42145..43970
Molecular Weight (calculated)
42614.0 Da
IEP (calculated)
9.721
GRAVY (calculated)
-0.275
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEKGWKAR DAAGAFMMDL ELVAEETDDA VPSIPPPQTP LEPMEYLSRS WSVSASEISK ILLGGGKKSS VAAASRLPEV TIPEQSALAT TSSVVPLPCH
101: QQNRAARRSS TSSGHHHQSI GKWFQVHHRE TRRAKQSSKE KQRAEKAHVH AMVSVARVAA AVAAVASATS SNAQATTTKM ATAMASATEL LASHCVEAAQ
201: HAGARHDQVA AAVQAAVGVR SPGDLMTLTA AAATALRGAA TLRQRAQRET RSNASILLPY EKAANSWSPD IWCKEGALLK RARKGGLHKI RVCIYINKRS
301: EVILKLKSKH IGGALTKKNK SVVYGVYSEL PTWAEPGKDC IEETCCCFGL STAQGLVEFE CEGNASKQEW IDDVQNLLRQ AALHDRVGDK LGLVKLS
101: QQNRAARRSS TSSGHHHQSI GKWFQVHHRE TRRAKQSSKE KQRAEKAHVH AMVSVARVAA AVAAVASATS SNAQATTTKM ATAMASATEL LASHCVEAAQ
201: HAGARHDQVA AAVQAAVGVR SPGDLMTLTA AAATALRGAA TLRQRAQRET RSNASILLPY EKAANSWSPD IWCKEGALLK RARKGGLHKI RVCIYINKRS
301: EVILKLKSKH IGGALTKKNK SVVYGVYSEL PTWAEPGKDC IEETCCCFGL STAQGLVEFE CEGNASKQEW IDDVQNLLRQ AALHDRVGDK LGLVKLS
001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
Arabidopsis Description
At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.