Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026246.1-P | Field mustard | nucleus | 99.26 | 99.26 |
| CDY64500 | Canola | cytosol | 96.77 | 96.77 |
| AT4G17350.1 | Thale cress | cytosol | 89.83 | 89.38 |
| CDY09634 | Canola | nucleus | 90.32 | 89.0 |
| CDX77767 | Canola | nucleus | 72.7 | 72.17 |
| CDY59298 | Canola | nucleus | 71.96 | 71.43 |
| KRH28119 | Soybean | nucleus | 55.34 | 57.03 |
| KRH04152 | Soybean | nucleus | 54.59 | 55.98 |
| KRH57434 | Soybean | nucleus | 53.6 | 54.82 |
| KRH77342 | Soybean | cytosol, endoplasmic reticulum, nucleus | 52.36 | 53.96 |
| PGSC0003DMT400012161 | Potato | nucleus | 51.12 | 52.82 |
| Solyc08g078500.2.1 | Tomato | cytosol | 50.87 | 52.56 |
| GSMUA_Achr8P11040_001 | Banana | cytosol | 40.94 | 49.25 |
| GSMUA_Achr11P... | Banana | nucleus | 47.15 | 47.98 |
| Os10t0560000-01 | Rice | cytosol | 44.17 | 46.97 |
| HORVU0Hr1G032140.1 | Barley | cytosol | 43.42 | 44.87 |
| HORVU0Hr1G027000.1 | Barley | cytosol | 43.42 | 44.87 |
| TraesCS6A01G250400.1 | Wheat | cytosol | 42.68 | 44.68 |
| TraesCS6B01G275000.1 | Wheat | cytosol | 42.68 | 44.56 |
| HORVU6Hr1G062990.1 | Barley | cytosol | 43.42 | 43.86 |
| Zm00001d000175_P001 | Maize | plastid | 43.18 | 43.83 |
| TraesCS6D01G232200.2 | Wheat | cytosol | 42.18 | 43.59 |
| TraesCS1A01G220700.1 | Wheat | cytosol | 41.44 | 43.49 |
| HORVU1Hr1G056150.4 | Barley | cytosol, nucleus | 40.94 | 43.08 |
| TraesCS1B01G234200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 40.69 | 42.71 |
| CDY40515 | Canola | cytosol | 46.15 | 42.37 |
| CDY32269 | Canola | cytosol | 39.21 | 41.8 |
| EER94492 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 42.43 | 41.61 |
| TraesCS3A01G147100.2 | Wheat | cytosol, endoplasmic reticulum, nucleus | 39.7 | 41.56 |
| Zm00001d029886_P001 | Maize | vacuole | 40.69 | 41.41 |
| TraesCS5A01G540500.1 | Wheat | cytosol | 37.72 | 40.97 |
| TraesCS4D01G363600.1 | Wheat | mitochondrion, nucleus | 40.2 | 40.91 |
| KXG31087 | Sorghum | nucleus | 42.93 | 40.52 |
| TraesCS1D01G222200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 41.19 | 40.0 |
| TraesCS5A01G540300.1 | Wheat | extracellular | 40.45 | 39.95 |
| TraesCS4B01G373700.1 | Wheat | nucleus | 39.45 | 39.55 |
| Zm00001d051361_P001 | Maize | plastid | 41.44 | 38.93 |
| CDY36869 | Canola | nucleus, plastid | 13.15 | 30.46 |
| CDY29764 | Canola | nucleus | 33.0 | 30.02 |
| CDY50683 | Canola | cytosol, endoplasmic reticulum, nucleus | 34.24 | 29.68 |
| CDX75286 | Canola | cytosol | 31.02 | 29.27 |
| CDX68890 | Canola | cytosol | 31.02 | 29.27 |
| CDY22328 | Canola | plastid | 32.01 | 28.6 |
| CDY14898 | Canola | cytosol | 31.76 | 28.38 |
| CDX94730 | Canola | cytosol | 31.51 | 28.29 |
| CDY46598 | Canola | mitochondrion | 33.0 | 27.54 |
| CDY16256 | Canola | cytosol | 27.3 | 27.5 |
| CDX93914 | Canola | nucleus | 32.75 | 26.88 |
| CDY53717 | Canola | nucleus | 32.51 | 26.68 |
| CDX96925 | Canola | plastid | 31.27 | 25.71 |
| CDY02766 | Canola | cytosol | 23.08 | 22.46 |
| CDY36868 | Canola | nucleus | 12.41 | 21.74 |
| CDY51283 | Canola | cytosol | 22.08 | 21.71 |
| CDY50798 | Canola | cytosol, endoplasmic reticulum, nucleus | 21.84 | 21.41 |
Protein Annotations
| EnsemblPlants:CDY65120 | EnsemblPlantsGene:GSBRNA2T00044201001 | InterPro:DUF828 | InterPro:IPR001849 | InterPro:PH_domain | InterPro:PH_pln |
| PANTHER:PTHR31351 | PANTHER:PTHR31351:SF2 | PFAM:PF05703 | PFAM:PF08458 | ProteinID:CDY65120 | ProteinID:CDY65120.1 |
| SEG:seg | SMART:SM00233 | UniParc:UPI0004EE8195 | UniProt:A0A078JF68 | MapMan:35.1 | : |
Description
BnaA01g35330DBnaA01g35330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JF68]
Coordinates
chrLK034663:-:13062..15066
Molecular Weight (calculated)
44624.1 Da
IEP (calculated)
9.759
GRAVY (calculated)
-0.492
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MERGGFYPDW KDTSSSLFGS ENMEEELEEA EELFSSIPQP QTPKEPMEFL SRSWSLSTSE IAKALALKHR QQQEQLCVAQ NNTPVLFPDA AAAHPLMTGK
101: TMNSFGTRRA GTLSKWFHHH REHSSSSNTT NYLKKKDKAR VENAHVHSAV SIAALAAGVA SVTSVSNCKR SSSKMALALG SATELLASHC VEMAERAGAD
201: RARVASTVRS SVDIHSPGDL MTLTAAAATA LRGEAALKAR QPKEARKNAA ITPFERSFSD SHWPANFQFR LEEPNLPLEG ELLQCARNGV QRTKRVCVYI
301: NKKSQVIIKL KSKHVGGAFS KKIKCIVYGV CDEKSAWPYR KERENSEEVY FGLKTGQGLL EFKCKNKVHK QRWVDGVQSL LRQVNCFEAA KCSLGSLSLT
401: NHR
101: TMNSFGTRRA GTLSKWFHHH REHSSSSNTT NYLKKKDKAR VENAHVHSAV SIAALAAGVA SVTSVSNCKR SSSKMALALG SATELLASHC VEMAERAGAD
201: RARVASTVRS SVDIHSPGDL MTLTAAAATA LRGEAALKAR QPKEARKNAA ITPFERSFSD SHWPANFQFR LEEPNLPLEG ELLQCARNGV QRTKRVCVYI
301: NKKSQVIIKL KSKHVGGAFS KKIKCIVYGV CDEKSAWPYR KERENSEEVY FGLKTGQGLL EFKCKNKVHK QRWVDGVQSL LRQVNCFEAA KCSLGSLSLT
401: NHR
001: MESGFYSDWK DTSSSSFFGS ENMEEELEDG VLRAEELFSS IPQPQTPKEP MEFLSRSWSL STSEISKALA LKHRQQQDQF CVGQNSPPVL FPDAAADPLV
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
101: AGKIMNSVGT RRAGTLSKWF HHNKEHSTSS TTTNLKKKDK VRVENAHVHS AVSIAALAAG LASVTSASNC KGSGSKMALA LASATELLAS HCVEMAERAG
201: ADHARVTSTV RSSVDIHSPG DLMTLTAAAA TALRGEAALK ARQPKEARKN AAITPFERSF SDSHWHANFQ YRLEEPNLPF EGELMQCARN GVQRTKRVCV
301: YINKKSQVMI KLKSKHVGGA FSKKIKCVVY GVCDEKSAWP YRKERENSEE VYFGLKTGQG LLEFKCKSKI HKQRWVDGVQ SLLRQVNCFE AAKCSLGSLN
401: LTGHT
Arabidopsis Description
At4g17350 [Source:UniProtKB/TrEMBL;Acc:Q5U1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.