CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75286	Canola	cytosol	99.06	99.06
AT4G32780.2	Thale cress	cytosol	90.16	90.38
VIT_04s0008g03570.t01	Wine grape	cytosol, nucleus, plastid	51.05	51.42
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	48.01	49.64
Os01t0231600-00	Rice	cytosol	10.3	48.35
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	47.78	48.23
Solyc08g066860.2.1	Tomato	nucleus	46.6	47.95
PGSC0003DMT400024848	Potato	cytosol	46.6	47.95
GSMUA_Achr10P...	Banana	nucleus	43.79	46.52
OQU86061	Sorghum	cytosol	45.9	45.9
Zm00001d039295_P001	Maize	cytosol	44.03	45.74
TraesCS3A01G155500.1	Wheat	cytosol	42.15	41.67
TraesCS3D01G163000.1	Wheat	cytosol	40.98	40.89
TraesCS3B01G182000.2	Wheat	mitochondrion	41.69	37.95
CDX94730	Canola	cytosol	37.0	35.19
CDY14898	Canola	cytosol	36.77	34.81
CDY22328	Canola	plastid	36.77	34.81
CDY50683	Canola	cytosol, endoplasmic reticulum, nucleus	37.24	34.19
CDY29764	Canola	nucleus	34.66	33.41
CDY36869	Canola	nucleus, plastid	13.35	32.76
CDY16256	Canola	cytosol	30.45	32.5
CDX96925	Canola	plastid	36.77	32.04
CDY53717	Canola	nucleus	36.77	31.98
CDX93914	Canola	nucleus	36.53	31.77
CDY46598	Canola	mitochondrion	35.83	31.68
CDY65120	Canola	cytosol	29.27	31.02
CDY36868	Canola	nucleus	16.39	30.43
CDY09634	Canola	nucleus	29.04	30.32
CDY64500	Canola	cytosol	28.34	30.02
CDX77767	Canola	nucleus	27.87	29.31
CDY59298	Canola	nucleus	27.17	28.57
CDY40515	Canola	cytosol	27.63	26.88
CDY32269	Canola	cytosol	22.72	25.66
CDY51283	Canola	cytosol	24.12	25.12
HORVU3Hr1G031590.6	Barley	cytosol, nucleus, plastid	40.05	25.11
CDY02766	Canola	cytosol	24.12	24.88
CDY50798	Canola	cytosol, endoplasmic reticulum, nucleus	23.65	24.57

Protein Annotations

EnsemblPlants:CDX68890	EnsemblPlantsGene:GSBRNA2T00130616001	InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF7
PFAM:PF05703	PFAM:PF08458	ProteinID:CDX68890	ProteinID:CDX68890.1	SEG:seg	SUPFAM:SSF50729
UniParc:UPI0004EDEA4E	MapMan:35.1	:	:	:	:

Description

BnaC01g05630D

Coordinates

chrLK031789:+:1744687..1748290

Molecular Weight (calculated)

46929.0 Da

IEP (calculated)

9.518

GRAVY (calculated)

-0.388

Length

427 amino acids

Sequence
(BLAST)

001: MTSLHNTLFT HSPTTLDQLM MCHTGKDSSW KKLENIEEEG PATVALEVKT ALPPETPTET MEFLGRSWSI SAVELTKAFF NNSAADTNSF LLSTIVNTNK
101: EVREDEEDST SMASSRDLLL PHIGNKTSPP ISPRTGREMK HLYKSMVRGR TMGRRLKDQK EKKKQETRTR NAEIHAAVSV AGVAAAVAAN AASNAVAAAE
201: HTVESTAVAA AVASAAALIA SHCIEMAGEI GAGYNQIETA VSSATNARTN GDVMALTASA ATALRGAAIL RARMERNNEN KSMLYATKEN VEREERNVFG
301: AMTFVSRGEE LLKRTRKGDL HWKQVSFNIN SNWQVVLKMK SKHVGGTFTK TKKCVVNGVC RDIPEWAYRG GRVEKMVESR AYFGVKTVER VIEFECVNKR
401: EKQMWIEGIQ QLLSSLETGS IVFTGKH

Best Arabidopsis Sequence Match ( AT4G32780.2 )
(BLAST)

001: MTSLHKTLFT QNPTTLDQLM MCHTGRDNSW KKLENIDEEG PSTVAREVRT ALPPETPTEM MEFLGRSWSI SAVELTRAFF NNSTADTNSF LLSTIVNTNK
101: EDREDEEDST SMASSRDLLL PHVGNKTSPP ITPRTGREMK HLYKSMIRGR TMGRRLKDQK EKKKQETRTR NAEIHAAVSV AGVAAVVAAT AASNAIAAAE
201: DAVESTTVAA AMASAAALIA SHCIEIAGEI GAGYNQIATA VSSATNARTN GDIMALTASA ATALRGAAIL RSRMERNNEN KAMLYATKEH VVEMEERNVF
301: GAMTFVSRGE ELLKRTRKGD LHWKQVSFNI NSNWQVVLKM KSKHVGGTFT KTKKCVVNGV CRDIPEWAHR GRADKMVERR AYFGVKTVER VIEFECGNKR
401: EKQMWIEGIQ QLLNSLEIGS SVQWKH

Arabidopsis Description

phosphoinositide binding [Source:TAIR;Acc:AT4G32780]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.