Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75286 | Canola | cytosol | 90.85 | 90.63 |
| Bra011382.1-P | Field mustard | cytosol | 90.85 | 90.63 |
| CDX68890 | Canola | cytosol | 90.38 | 90.16 |
| Os01t0231600-00 | Rice | cytosol | 10.8 | 50.55 |
| VIT_04s0008g03570.t01 | Wine grape | cytosol, nucleus, plastid | 50.0 | 50.24 |
| KRH62055 | Soybean | cytosol, extracellular, nucleus, plastid | 47.89 | 49.39 |
| Solyc08g066860.2.1 | Tomato | nucleus | 46.48 | 47.71 |
| KRH52723 | Soybean | cytosol, extracellular, nucleus, plastid | 47.18 | 47.52 |
| PGSC0003DMT400024848 | Potato | cytosol | 46.01 | 47.23 |
| GSMUA_Achr10P... | Banana | nucleus | 42.72 | 45.27 |
| OQU86061 | Sorghum | cytosol | 44.13 | 44.03 |
| Zm00001d039295_P001 | Maize | cytosol | 42.25 | 43.8 |
| TraesCS3A01G155500.1 | Wheat | cytosol | 41.55 | 40.97 |
| TraesCS3D01G163000.1 | Wheat | cytosol | 40.38 | 40.19 |
| TraesCS3B01G182000.2 | Wheat | mitochondrion | 41.08 | 37.31 |
| AT5G43870.1 | Thale cress | plastid | 37.09 | 34.88 |
| AT4G14740.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 37.09 | 33.26 |
| AT3G22810.1 | Thale cress | cytosol | 36.85 | 33.26 |
| AT3G63300.1 | Thale cress | plastid | 37.56 | 32.13 |
| AT4G17350.1 | Thale cress | cytosol | 27.93 | 29.38 |
| AT5G47440.1 | Thale cress | nucleus | 27.7 | 29.06 |
| AT4G16670.1 | Thale cress | cytosol | 26.76 | 26.57 |
| HORVU3Hr1G031590.6 | Barley | cytosol, nucleus, plastid | 39.2 | 24.52 |
| AT5G57770.1 | Thale cress | cytosol | 23.24 | 24.38 |
Protein Annotations
| MapMan:35.1 | EntrezGene:829414 | UniProt:A0A1P8B8L5 | ProteinID:AEE86117.2 | ProteinID:ANM67934.1 | ArrayExpress:AT4G32780 |
| EnsemblPlantsGene:AT4G32780 | RefSeq:AT4G32780 | TAIR:AT4G32780 | RefSeq:AT4G32780-TAIR-G | EnsemblPlants:AT4G32780.2 | Unigene:At.31638 |
| InterPro:DUF828 | GO:GO:0005575 | RefSeq:NP_001320118.1 | RefSeq:NP_001329726.1 | PFAM:PF05703 | PFAM:PF08458 |
| InterPro:PH_pln | PANTHER:PTHR31351 | PANTHER:PTHR31351:SF7 | SUPFAM:SSF50729 | UniParc:UPI00016EB83F | SEG:seg |
Description
phosphoinositide binding [Source:TAIR;Acc:AT4G32780]
Coordinates
chr4:+:15808852..15811926
Molecular Weight (calculated)
47205.4 Da
IEP (calculated)
9.718
GRAVY (calculated)
-0.448
Length
426 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSLHKTLFT QNPTTLDQLM MCHTGRDNSW KKLENIDEEG PSTVAREVRT ALPPETPTEM MEFLGRSWSI SAVELTRAFF NNSTADTNSF LLSTIVNTNK
101: EDREDEEDST SMASSRDLLL PHVGNKTSPP ITPRTGREMK HLYKSMIRGR TMGRRLKDQK EKKKQETRTR NAEIHAAVSV AGVAAVVAAT AASNAIAAAE
201: DAVESTTVAA AMASAAALIA SHCIEIAGEI GAGYNQIATA VSSATNARTN GDIMALTASA ATALRGAAIL RSRMERNNEN KAMLYATKEH VVEMEERNVF
301: GAMTFVSRGE ELLKRTRKGD LHWKQVSFNI NSNWQVVLKM KSKHVGGTFT KTKKCVVNGV CRDIPEWAHR GRADKMVERR AYFGVKTVER VIEFECGNKR
401: EKQMWIEGIQ QLLNSLEIGS SVQWKH
101: EDREDEEDST SMASSRDLLL PHVGNKTSPP ITPRTGREMK HLYKSMIRGR TMGRRLKDQK EKKKQETRTR NAEIHAAVSV AGVAAVVAAT AASNAIAAAE
201: DAVESTTVAA AMASAAALIA SHCIEIAGEI GAGYNQIATA VSSATNARTN GDIMALTASA ATALRGAAIL RSRMERNNEN KAMLYATKEH VVEMEERNVF
301: GAMTFVSRGE ELLKRTRKGD LHWKQVSFNI NSNWQVVLKM KSKHVGGTFT KTKKCVVNGV CRDIPEWAHR GRADKMVERR AYFGVKTVER VIEFECGNKR
401: EKQMWIEGIQ QLLNSLEIGS SVQWKH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.