Factsheet for VIT_04s0008g03570.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	65.33	67.07
PGSC0003DMT400024848	Potato	cytosol	65.57	66.99
Solyc08g066860.2.1	Tomato	nucleus	65.33	66.75
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	63.92	64.07
GSMUA_Achr10P...	Banana	nucleus	52.59	55.47
Os01t0231600-00	Rice	cytosol	11.32	52.75
Bra011382.1-P	Field mustard	cytosol	51.42	51.05
CDX75286	Canola	cytosol	51.42	51.05
CDX68890	Canola	cytosol	51.42	51.05
AT4G32780.2	Thale cress	cytosol	50.24	50.0
OQU86061	Sorghum	cytosol	49.76	49.41
Zm00001d039295_P001	Maize	cytosol	47.64	49.15
TraesCS3A01G155500.1	Wheat	cytosol	49.76	48.84
TraesCS3D01G163000.1	Wheat	cytosol	49.29	48.83
TraesCS3B01G182000.2	Wheat	mitochondrion	49.29	44.56
VIT_05s0020g04020.t01	Wine grape	nucleus	41.98	38.61
VIT_07s0151g00290.t01	Wine grape	nucleus	41.98	37.24
HORVU3Hr1G031590.6	Barley	cytosol, nucleus, plastid	46.23	28.78
VIT_11s0037g01110.t01	Wine grape	cytosol	22.88	25.8
VIT_11s0037g01240.t01	Wine grape	cytosol	23.11	25.0

Protein Annotations

ArrayExpress:VIT_04s0008g03570	EMBL:FN595231	EnsemblPlants:VIT_04s0008g03570.t01	EnsemblPlantsGene:VIT_04s0008g03570	InterPro:DUF828	InterPro:IPR001849
InterPro:PH_domain	InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF7	PFAM:PF05703	PFAM:PF08458
ProteinID:CBI20866	ProteinID:CBI20866.3	SEG:seg	SMART:SM00233	UniParc:UPI0001BE1804	UniProt:D7SUB7
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4:-:2917397..2920694

Molecular Weight (calculated)

46160.2 Da

IEP (calculated)

7.897

GRAVY (calculated)

-0.264

Length

424 amino acids

Sequence
(BLAST)

001: MKSELAWKVS VGSCGGFKCP SRRLENIEED GPASWLPETC APPETPIESM EFLARSWSLS AMELAKALAA DNLDKYSAFC SVGNEAEIHV ASSVASEEAI
101: IQQLPGGGSP PISPRDSDDM KELFLLHQAL NPDFLSNQQL LRNGLYKSIM RGKTFGRWLK DQKERKKQEI RTHNAQLHAA VSVAGVAAAV AALAASNAAS
201: PEVLATQHKK PSKTSAAIAS AAALVASHCI EIAEDMGADH DHILMAVNSA VNARTNGDIM TLTAGAATAL RGAATLRARL QKGCGTATLV LSEEQIEEGR
301: ESNILIALNF VSRGGELLKR TRKGALHWKQ VSFNIDSCWQ VAVKMKSKHM AGTFTKKKKC VVSGVYCDIP AWPGREREES SEQRAYFGIK TDDRIIEFEC
401: RNNSDKQMWA EGIQYMLHCR ASMI

Best Arabidopsis Sequence Match ( AT4G32780.2 )
(BLAST)

001: MTSLHKTLFT QNPTTLDQLM MCHTGRDNSW KKLENIDEEG PSTVAREVRT ALPPETPTEM MEFLGRSWSI SAVELTRAFF NNSTADTNSF LLSTIVNTNK
101: EDREDEEDST SMASSRDLLL PHVGNKTSPP ITPRTGREMK HLYKSMIRGR TMGRRLKDQK EKKKQETRTR NAEIHAAVSV AGVAAVVAAT AASNAIAAAE
201: DAVESTTVAA AMASAAALIA SHCIEIAGEI GAGYNQIATA VSSATNARTN GDIMALTASA ATALRGAAIL RSRMERNNEN KAMLYATKEH VVEMEERNVF
301: GAMTFVSRGE ELLKRTRKGD LHWKQVSFNI NSNWQVVLKM KSKHVGGTFT KTKKCVVNGV CRDIPEWAHR GRADKMVERR AYFGVKTVER VIEFECGNKR
401: EKQMWIEGIQ QLLNSLEIGS SVQWKH

Arabidopsis Description

phosphoinositide binding [Source:TAIR;Acc:AT4G32780]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.