Factsheet for Solyc08g066860.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
golgi 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol, golgi
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024848	Potato	cytosol	95.9	95.9
VIT_04s0008g03570.t01	Wine grape	cytosol, nucleus, plastid	66.75	65.33
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	60.24	60.53
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	59.76	58.63
GSMUA_Achr10P...	Banana	nucleus	51.81	53.48
Os01t0231600-00	Rice	cytosol	11.33	51.65
Bra011382.1-P	Field mustard	cytosol	48.19	46.84
CDX75286	Canola	cytosol	48.19	46.84
CDX68890	Canola	cytosol	47.95	46.6
AT4G32780.2	Thale cress	cytosol	47.71	46.48
Zm00001d039295_P001	Maize	cytosol	46.02	46.47
OQU86061	Sorghum	cytosol	47.47	46.14
TraesCS3D01G163000.1	Wheat	cytosol	47.23	45.79
TraesCS3A01G155500.1	Wheat	cytosol	46.75	44.91
TraesCS3B01G182000.2	Wheat	mitochondrion	46.51	41.15
Solyc08g078500.2.1	Tomato	cytosol	35.66	37.95
Solyc09g082580.2.1	Tomato	cytosol	42.17	37.63
Solyc09g065590.2.1	Tomato	plastid	39.28	33.47
Solyc07g006320.2.1	Tomato	cytosol	25.54	27.18
HORVU3Hr1G031590.6	Barley	cytosol, nucleus, plastid	44.34	27.02

Protein Annotations

EnsemblPlants:Solyc08g066860.2.1	EnsemblPlantsGene:Solyc08g066860.2	Gene3D:2.30.29.30	InterPro:DUF828	InterPro:IPR001849	InterPro:IPR011993
InterPro:PH-like_dom_sf	InterPro:PH_domain	InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF7	PFAM:PF05703
PFAM:PF08458	SEG:seg	SMART:SM00233	SUPFAM:SSF50729	UniParc:UPI000276BEB3	UniProt:K4CLR2
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:55736821..55739694

Molecular Weight (calculated)

44958.7 Da

IEP (calculated)

7.905

GRAVY (calculated)

-0.366

Length

415 amino acids

Sequence
(BLAST)

001: MEKVSSCGVK CKSNRLEGID EDGATNWLPG ACPPPETPTE SMEFLARSWS LSAKELSKAL SHTKQTSYVD EKMSFSSLQG QHGKTSIMEE PQEQPLPNSD
101: SPPVSPRGSD DTKELFLLHQ ALNSDFLSSH HLLKAGLYRT VMRGKTMGRW LKDQKEKKKQ ELRTHSAQVH AAVSVAGVAA AVAALATLSV TSPEQSITKH
201: NTSSKMSTAI ASAAALVASH CIEIAEDMGA EQDQILSVVN SAINARTSGD IMTLTAGAAT ALRGAATLRA RLQKGNGAAA IALADEGVEG NKEATVTAAL
301: SFVAKGGELL KRTRKGDLHW KQVSFTINSD WQVIAKMKSK HMGGTFTKKK ECVVSGVCCD VPAWLGRDEE HDEQKCYFGI QTADRMIEFE CRNKGEKQMW
401: VDGIQQILCC RMTMT

Best Arabidopsis Sequence Match ( AT4G32780.2 )
(BLAST)

001: MTSLHKTLFT QNPTTLDQLM MCHTGRDNSW KKLENIDEEG PSTVAREVRT ALPPETPTEM MEFLGRSWSI SAVELTRAFF NNSTADTNSF LLSTIVNTNK
101: EDREDEEDST SMASSRDLLL PHVGNKTSPP ITPRTGREMK HLYKSMIRGR TMGRRLKDQK EKKKQETRTR NAEIHAAVSV AGVAAVVAAT AASNAIAAAE
201: DAVESTTVAA AMASAAALIA SHCIEIAGEI GAGYNQIATA VSSATNARTN GDIMALTASA ATALRGAAIL RSRMERNNEN KAMLYATKEH VVEMEERNVF
301: GAMTFVSRGE ELLKRTRKGD LHWKQVSFNI NSNWQVVLKM KSKHVGGTFT KTKKCVVNGV CRDIPEWAHR GRADKMVERR AYFGVKTVER VIEFECGNKR
401: EKQMWIEGIQ QLLNSLEIGS SVQWKH

Arabidopsis Description

phosphoinositide binding [Source:TAIR;Acc:AT4G32780]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.