Factsheet for GSMUA_Achr10P26290_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	endoplasmic reticulum, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0231600-00	Rice	cytosol	12.69	56.04
Zm00001d039295_P001	Maize	cytosol	55.72	54.5
OQU86061	Sorghum	cytosol	57.21	53.86
VIT_04s0008g03570.t01	Wine grape	cytosol, nucleus, plastid	55.47	52.59
TraesCS3D01G163000.1	Wheat	cytosol	55.97	52.57
PGSC0003DMT400024848	Potato	cytosol	53.98	52.29
TraesCS3A01G155500.1	Wheat	cytosol	55.72	51.85
Solyc08g066860.2.1	Tomato	nucleus	53.48	51.81
KRH62055	Soybean	cytosol, extracellular, nucleus, plastid	51.99	50.61
KRH52723	Soybean	cytosol, extracellular, nucleus, plastid	51.99	49.41
TraesCS3B01G182000.2	Wheat	mitochondrion	55.97	47.97
Bra011382.1-P	Field mustard	cytosol	46.52	43.79
CDX75286	Canola	cytosol	46.52	43.79
CDX68890	Canola	cytosol	46.52	43.79
AT4G32780.2	Thale cress	cytosol	45.27	42.72
GSMUA_Achr8P11040_001	Banana	cytosol	33.33	40.0
GSMUA_Achr5P02990_001	Banana	nucleus	42.54	37.67
GSMUA_AchrUn_...	Banana	nucleus	41.54	36.78
GSMUA_Achr7P07730_001	Banana	nucleus	40.05	36.18
GSMUA_Achr11P...	Banana	nucleus	35.57	36.11
GSMUA_Achr4P21160_001	Banana	cytosol	8.71	36.08
GSMUA_Achr4P21170_001	Banana	cytosol	32.09	35.15
HORVU3Hr1G031590.6	Barley	cytosol, nucleus, plastid	52.74	31.13
GSMUA_Achr4P02070_001	Banana	cytosol	23.13	23.97
GSMUA_Achr10P...	Banana	cytosol	22.14	23.06

Protein Annotations

EnsemblPlants:GSMUA_Achr10P26290_001	EnsemblPlants:GSMUA_Achr10T26290_001	EnsemblPlantsGene:GSMUA_Achr10G26290_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF7	PFAM:PF05703	PFAM:PF08458
SEG:seg	TMHMM:TMhelix	UniParc:UPI000294CA51	UniProt:M0RLK3	MapMan:35.1	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G26290_001]

Coordinates

chr10:-:29921091..29923079

Molecular Weight (calculated)

43544.0 Da

IEP (calculated)

9.305

GRAVY (calculated)

-0.305

Length

402 amino acids

Sequence
(BLAST)

001: MEWCSYSHRH HHHHHHHHAK GASMRLENIE EERPASCLPV SLRPPETPTE AMEFLARSWS LSAVEISKAL TLFENRKPSD STGVERQNSN PPLSAAREEL
101: KLPVADEGVG VSPPISPRDN IDLKLLRGAA RGKTMGGWLK DQKEKRRTEA RTRKAQAYAA TSVAGVAAAV AAVVASAVFS PDASRTNCGN KITAAIASAA
201: ALVASHCVEI AQTMGAAHDQ ILKVVHSAVG AQTSGDIMAL TAGAATALRG AATLRARLYK EIQGATAAGD DKESSDGCSS AFTFVAKGGE LVKRTRKGIL
301: HWKQVSVYIN SNWQVVVKTK STHMAGTFVK KKKCFVIDVC ANIPAWPGRE VEDGSDQRAY FGIRTPERLI EFECKKCDEG IWIEGIRQML DCRANMNIAK
401: AM

Best Arabidopsis Sequence Match ( AT4G32780.2 )
(BLAST)

001: MTSLHKTLFT QNPTTLDQLM MCHTGRDNSW KKLENIDEEG PSTVAREVRT ALPPETPTEM MEFLGRSWSI SAVELTRAFF NNSTADTNSF LLSTIVNTNK
101: EDREDEEDST SMASSRDLLL PHVGNKTSPP ITPRTGREMK HLYKSMIRGR TMGRRLKDQK EKKKQETRTR NAEIHAAVSV AGVAAVVAAT AASNAIAAAE
201: DAVESTTVAA AMASAAALIA SHCIEIAGEI GAGYNQIATA VSSATNARTN GDIMALTASA ATALRGAAIL RSRMERNNEN KAMLYATKEH VVEMEERNVF
301: GAMTFVSRGE ELLKRTRKGD LHWKQVSFNI NSNWQVVLKM KSKHVGGTFT KTKKCVVNGV CRDIPEWAHR GRADKMVERR AYFGVKTVER VIEFECGNKR
401: EKQMWIEGIQ QLLNSLEIGS SVQWKH

Arabidopsis Description

phosphoinositide binding [Source:TAIR;Acc:AT4G32780]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.