Factsheet for GSMUA_Achr4P02070_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	68.3	68.65
Os04t0498000-01	Rice	cytosol	18.56	63.16
OQU81872	Sorghum	cytosol	52.84	50.87
VIT_11s0037g01110.t01	Wine grape	cytosol	48.2	49.73
VIT_11s0037g01240.t01	Wine grape	cytosol	49.48	48.98
Zm00001d003160_P001	Maize	cytosol	49.23	47.28
Solyc07g006320.2.1	Tomato	cytosol	47.42	47.18
PGSC0003DMT400029034	Potato	cytosol	47.16	46.92
Zm00001d025771_P001	Maize	cytosol	51.03	46.37
TraesCS2B01G372200.1	Wheat	cytosol	50.0	46.08
TraesCS2D01G352200.1	Wheat	cytosol	49.74	45.84
KRH18946	Soybean	nucleus	45.62	45.74
TraesCS2A01G355900.2	Wheat	cytosol	49.48	45.61
KRH02952	Soybean	cytosol	44.59	45.05
CDY51283	Canola	cytosol	44.85	42.44
CDY02766	Canola	cytosol	45.1	42.27
Bra002698.1-P	Field mustard	cytosol	44.33	42.16
Bra020413.1-P	Field mustard	cytosol	44.59	41.89
AT5G57770.1	Thale cress	cytosol	43.81	41.87
CDY50798	Canola	cytosol, endoplasmic reticulum, nucleus	43.81	41.36
GSMUA_Achr4P21170_001	Banana	cytosol	25.26	26.7
GSMUA_Achr8P11040_001	Banana	cytosol	21.65	25.07
GSMUA_Achr5P02990_001	Banana	nucleus	28.61	24.45
GSMUA_Achr7P07730_001	Banana	nucleus	27.32	23.82
GSMUA_AchrUn_...	Banana	nucleus	27.84	23.79
GSMUA_Achr11P...	Banana	nucleus	24.23	23.74
GSMUA_Achr10P...	Banana	nucleus	23.97	23.13
GSMUA_Achr4P21160_001	Banana	cytosol	3.35	13.4

Protein Annotations

EnsemblPlants:GSMUA_Achr4P02070_001	EnsemblPlants:GSMUA_Achr4T02070_001	EnsemblPlantsGene:GSMUA_Achr4G02070_001	InterPro:DUF828	InterPro:PH_pln	ncoils:Coil
PANTHER:PTHR31351	PANTHER:PTHR31351:SF3	PFAM:PF05703	PFAM:PF08458	SEG:seg	UniParc:UPI000295A85C
UniProt:M0SKC4	MapMan:35.2	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G02070_001]

Coordinates

chr4:+:1839046..1842096

Molecular Weight (calculated)

42761.7 Da

IEP (calculated)

9.262

GRAVY (calculated)

-0.259

Length

388 amino acids

Sequence
(BLAST)

001: MDLEMKATGP EASLDLLSHA WCNSAIQVFK PTVDECSSMF KDKQIVALEN DKRAPSSKGE RSFKVDEGDF KSTPQIKLDD LKSWIWLQKA IHPELDYDMC
101: TRQKWKRTSL QFRKIASWNG ISIKKWLKEM KQKRKEEKRL HKAEVHAAIS VAGVAAALAA IAAEDTEANK QKSLKESAVA SAAALVAAQC AQVAEAVGAK
201: REQLSSAINE AVTVTDASNI ITLTAAAATS LRGVATLRGR QSHTKKIKGS SPTLLCDELD FNFERCRALL AKGDEILVAT SDAGKCRLRS VSAILNKDDK
301: VILKIKKINM LMALTTATEC IINELHTNPL GEPTQDANGA YCIEMTTSQG KIDLKINDYV CYKKWITTIN HMLMLSITFS RKGHVPLP

Best Arabidopsis Sequence Match ( AT5G57770.1 )
(BLAST)

001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN

Arabidopsis Description

Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.