Factsheet for Bra002698.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51283	Canola	cytosol	99.26	98.78
AT5G57770.1	Thale cress	cytosol	88.97	89.41
Bra020413.1-P	Field mustard	cytosol	88.24	87.17
VIT_11s0037g01110.t01	Wine grape	cytosol	55.39	60.11
Solyc07g006320.2.1	Tomato	cytosol	57.11	59.74
VIT_11s0037g01240.t01	Wine grape	cytosol	57.35	59.69
KRH02952	Soybean	cytosol	56.13	59.64
PGSC0003DMT400029034	Potato	cytosol	56.37	58.97
KRH18946	Soybean	nucleus	55.39	58.4
Os04t0498000-01	Rice	cytosol	14.46	51.75
GSMUA_Achr4P02070_001	Banana	cytosol	42.16	44.33
GSMUA_Achr10P...	Banana	cytosol	40.44	42.75
TraesCS2D01G352200.1	Wheat	cytosol	40.93	39.67
TraesCS2A01G355900.2	Wheat	cytosol	40.93	39.67
OQU81872	Sorghum	cytosol	38.97	39.45
TraesCS2B01G372200.1	Wheat	cytosol	40.2	38.95
Zm00001d003160_P001	Maize	cytosol	37.99	38.37
Zm00001d025771_P001	Maize	cytosol	38.97	37.24
Bra033702.1-P	Field mustard	cytosol, plastid	27.45	26.35
Bra036001.1-P	Field mustard	nucleus	28.68	25.94
Bra023803.1-P	Field mustard	cytosol	27.7	24.57
Bra039719.1-P	Field mustard	nucleus	27.94	24.52
Bra036892.1-P	Field mustard	nucleus	27.94	24.36
Bra011382.1-P	Field mustard	cytosol	25.25	24.12
Bra024944.1-P	Field mustard	cytosol	23.53	23.7
Bra040444.1-P	Field mustard	plastid	27.94	23.46
Bra026246.1-P	Field mustard	nucleus	21.32	21.59
Bra038497.1-P	Field mustard	nucleus	19.61	18.56

Protein Annotations

EnsemblPlants:Bra002698.1	EnsemblPlants:Bra002698.1-P	EnsemblPlantsGene:Bra002698	InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351
PANTHER:PTHR31351:SF3	PFAM:PF05703	PFAM:PF08458	SEG:seg	UniParc:UPI0002545162	UniProt:M4CER7
MapMan:35.2	:	:	:	:	:

Description

AT5G57770 (E=2e-152) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828, plant (InterPro:IPR008546); Has 104 Blast hits to 104 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Coordinates

chrA10:-:8185098..8187134

Molecular Weight (calculated)

45495.3 Da

IEP (calculated)

8.732

GRAVY (calculated)

-0.463

Length

408 amino acids

Sequence
(BLAST)

001: MELALTSTDH HLQLSNNPSP SEAHPDSMDF LSREWCNFAV QSLQPDHYDR SIVPVETSIA KFQGDSSPVS CSKMDKSLKM DDPDFKPSMP SWKTNDVKSW
101: IWMQQAMHPE LSYEGFFRKK LKLPWKITPS IKKWWKEIKA KRKEEVRLQR AEVHAAVSLA GLAAALAAVA SEKAEKDGGN NRPNTKEAAV ASAAAVVAAQ
201: CAQMAETMGA NRDQLSTMIG SAMTGTSVSE ILALTASATT SLKGAATLKA RRSCNINRLS GSAPVLPIEE SSELPPEFDK NRYLLSQGTD LFVETPDGDF
301: KARTVSIVLK KEGKVILKMK KHNLLRTKKE CVVTNVHVEL YKDSESEDNN IEDTCYLIVL KTNRGAMKLD MADDYGRYKT WITTIQHMLT LSSSSFRTKY
401: DLTFYNKN

Best Arabidopsis Sequence Match ( AT5G57770.1 )
(BLAST)

001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN

Arabidopsis Description

Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.