Factsheet for TraesCS2B01G372200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G352200.1	Wheat	cytosol	97.86	97.86
TraesCS2A01G355900.2	Wheat	cytosol	97.15	97.15
Os04t0498000-01	Rice	cytosol	22.57	83.33
OQU81872	Sorghum	cytosol	71.5	74.69
Zm00001d003160_P001	Maize	cytosol	67.22	70.05
Zm00001d025771_P001	Maize	cytosol	70.31	69.32
GSMUA_Achr10P...	Banana	cytosol	47.74	52.07
GSMUA_Achr4P02070_001	Banana	cytosol	46.08	50.0
VIT_11s0037g01240.t01	Wine grape	cytosol	39.91	42.86
VIT_11s0037g01110.t01	Wine grape	cytosol	38.24	42.82
KRH18946	Soybean	nucleus	39.19	42.64
AT5G57770.1	Thale cress	cytosol	40.62	42.12
KRH02952	Soybean	cytosol	38.24	41.93
Solyc07g006320.2.1	Tomato	cytosol	38.72	41.79
PGSC0003DMT400029034	Potato	cytosol	38.48	41.54
Bra020413.1-P	Field mustard	cytosol	39.67	40.44
CDY02766	Canola	cytosol	39.67	40.34
Bra002698.1-P	Field mustard	cytosol	38.95	40.2
CDY50798	Canola	cytosol, endoplasmic reticulum, nucleus	39.19	40.15
CDY51283	Canola	cytosol	38.95	40.0
TraesCS1B01G234200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	23.75	26.04
TraesCS6B01G275000.1	Wheat	cytosol	23.75	25.91
TraesCS5B01G381200.1	Wheat	nucleus	27.32	24.78
TraesCS4B01G373700.1	Wheat	nucleus	23.28	24.38
TraesCS5B01G060100.2	Wheat	nucleus	26.84	24.09
TraesCS3B01G182000.2	Wheat	mitochondrion	23.75	21.32

Protein Annotations

EnsemblPlants:TraesCS2B01G372200.1	EnsemblPlantsGene:TraesCS2B01G372200	InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF3
PFAM:PF05703	PFAM:PF08458	SEG:seg	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr2B:+:530415282..530417304

Molecular Weight (calculated)

45404.8 Da

IEP (calculated)

8.588

GRAVY (calculated)

-0.346

Length

421 amino acids

Sequence
(BLAST)

001: MEDLVPAKAF YSAAAVGMEP DHRGLMAIMR EEPPPSEEPM DLLSSAWCSS AIQVLQTGPK EEDRSLALVE HPVMGLDDDR RDLSQLQRSD RSLVVDDSGF
101: GGAAQPQWKY DDLKSWIWLQ KAIHPELDYD NKKKWLPRKM AAPWSGISLK KWVKERKQKR KEEARLHRAE VHAAVSVAGV AAVLAAIAAE NSAPAARGSA
201: SASMRETAVA SAAALVAAQC AKVAEAAGAT RDQVAAAVNA AVAATDASNV ITLTAAAATS LRGAAALRGR RGGSGGHGQG ERADQGGTAP WQDDLDFDFN
301: YARSKAALAK GDELFVAMPD GKWKLHTVSA ATDRNGKVVL RIKKMNLVMQ AFSNARECVV EDVRPCAPEK ASREAEATYP VEVRTSRGKV ELRADDYAVY
401: KRWVSTVTHM LTSSTAITMR N

Best Arabidopsis Sequence Match ( AT5G57770.2 )
(BLAST)

001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESM QLASQSFFLF

Arabidopsis Description

Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.