CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003160_P001	Maize	cytosol	87.1	86.88
Os04t0498000-01	Rice	cytosol	22.08	78.07
TraesCS2B01G372200.1	Wheat	cytosol	74.69	71.5
TraesCS2D01G352200.1	Wheat	cytosol	74.44	71.26
TraesCS2A01G355900.2	Wheat	cytosol	74.19	71.02
GSMUA_Achr10P...	Banana	cytosol	51.61	53.89
GSMUA_Achr4P02070_001	Banana	cytosol	50.87	52.84
VIT_11s0037g01240.t01	Wine grape	cytosol	41.69	42.86
VIT_11s0037g01110.t01	Wine grape	cytosol	39.45	42.29
KRH18946	Soybean	nucleus	39.7	41.34
Solyc07g006320.2.1	Tomato	cytosol	39.45	40.77
AT5G57770.1	Thale cress	cytosol	40.69	40.39
KRH02952	Soybean	cytosol	38.46	40.36
PGSC0003DMT400029034	Potato	cytosol	38.96	40.26
CDY50798	Canola	cytosol, endoplasmic reticulum, nucleus	40.2	39.42
CDY02766	Canola	cytosol	40.45	39.37
CDY51283	Canola	cytosol	39.95	39.27
Bra020413.1-P	Field mustard	cytosol	39.95	38.98
Bra002698.1-P	Field mustard	cytosol	39.45	38.97
EER94492	Sorghum	cytosol, endoplasmic reticulum, nucleus	26.05	25.55
KXG37970	Sorghum	cytosol	28.78	24.63
OQU79534	Sorghum	cytosol, mitochondrion, nucleus	28.78	23.77
KXG31087	Sorghum	nucleus	24.07	22.72
OQU86061	Sorghum	cytosol	23.57	22.25

Protein Annotations

EnsemblPlants:OQU81872	EnsemblPlantsGene:SORBI_3006G135300	InterPro:DUF828	InterPro:PH_pln	ncoils:Coil	PANTHER:PTHR31351
PANTHER:PTHR31351:SF3	PFAM:PF05703	PFAM:PF08458	ProteinID:KXG26641.1	ProteinID:OQU81872	ProteinID:OQU81872.1
ProteinID:OQU81873.1	ProteinID:OQU81874.1	SEG:seg	UniParc:UPI00081AE741	UniProt:A0A1B6PLU5	MapMan:35.2

Description

hypothetical protein

Coordinates

chr6:+:49825207..49828377

Molecular Weight (calculated)

43571.8 Da

IEP (calculated)

9.509

GRAVY (calculated)

-0.370

Length

403 amino acids

Sequence
(BLAST)

001: MEPERGLIAY EEPAPESTDL LSSAWCSSAI QVVHSGPKEC SMALVEHPVM ALGNDRNDML AKSDRSLVVD NSSFSTTQQW KYDDLKSWIW LQKAIHPELD
101: YDLCLKKKWL PRKMAPWNGI SLKKWVKERK QKRKEEARLQ RAEVHAAVSV AGVAAALAAI AAENAAPPRA PGMRETAVAS AAALVAAQCA KVAEAAGASR
201: DQVAAAVDAA RASTDAGSVI TLTAAAATSL RGAATLRGRR STSGGGHGQN ERVEHSGSAL SQDDLDFDFN HARSRAALAK GDEMLVAMPD GKWKLHTVSA
301: ASNKRGEIVL RIKKTNLVMA FSHAKESVIR DVRPCAPEKP SHDEGATYPV EVTTNKGKVE LRADDYGVYK RWVATLSHML VMSTAVSVSV STRHEPPRPA
401: RRD

Best Arabidopsis Sequence Match ( AT5G57770.1 )
(BLAST)

001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN

Arabidopsis Description

Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.