Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020413.1-P | Field mustard | cytosol | 96.62 | 96.85 |
| AT5G57770.1 | Thale cress | cytosol | 90.1 | 91.87 |
| CDY51283 | Canola | cytosol | 88.41 | 89.27 |
| CDY50798 | Canola | cytosol, endoplasmic reticulum, nucleus | 85.27 | 85.89 |
| Solyc07g006320.2.1 | Tomato | cytosol | 57.25 | 60.77 |
| VIT_11s0037g01240.t01 | Wine grape | cytosol | 57.25 | 60.46 |
| PGSC0003DMT400029034 | Potato | cytosol | 56.76 | 60.26 |
| VIT_11s0037g01110.t01 | Wine grape | cytosol | 54.59 | 60.11 |
| KRH18946 | Soybean | nucleus | 56.04 | 59.95 |
| KRH02952 | Soybean | cytosol | 55.56 | 59.9 |
| Os04t0498000-01 | Rice | cytosol | 14.49 | 52.63 |
| GSMUA_Achr4P02070_001 | Banana | cytosol | 42.27 | 45.1 |
| GSMUA_Achr10P... | Banana | cytosol | 40.34 | 43.26 |
| OQU81872 | Sorghum | cytosol | 39.37 | 40.45 |
| TraesCS2D01G352200.1 | Wheat | cytosol | 41.06 | 40.38 |
| TraesCS2A01G355900.2 | Wheat | cytosol | 41.06 | 40.38 |
| TraesCS2B01G372200.1 | Wheat | cytosol | 40.34 | 39.67 |
| Zm00001d003160_P001 | Maize | cytosol | 38.65 | 39.6 |
| Zm00001d025771_P001 | Maize | cytosol | 38.89 | 37.7 |
| CDY22328 | Canola | plastid | 28.99 | 26.61 |
| CDX94730 | Canola | cytosol | 28.74 | 26.5 |
| CDY14898 | Canola | cytosol | 28.74 | 26.39 |
| CDY16256 | Canola | cytosol | 24.64 | 25.5 |
| CDY50683 | Canola | cytosol, endoplasmic reticulum, nucleus | 28.5 | 25.38 |
| CDX93914 | Canola | nucleus | 29.23 | 24.64 |
| CDY53717 | Canola | nucleus | 28.99 | 24.44 |
| CDY29764 | Canola | nucleus | 26.09 | 24.38 |
| CDX75286 | Canola | cytosol | 24.88 | 24.12 |
| CDX68890 | Canola | cytosol | 24.88 | 24.12 |
| CDY59298 | Canola | nucleus | 23.43 | 23.89 |
| CDX77767 | Canola | nucleus | 23.43 | 23.89 |
| CDX96925 | Canola | plastid | 28.02 | 23.67 |
| CDY46598 | Canola | mitochondrion | 27.29 | 23.4 |
| CDY65120 | Canola | cytosol | 22.46 | 23.08 |
| CDY09634 | Canola | nucleus | 21.98 | 22.25 |
| CDY64500 | Canola | cytosol | 21.5 | 22.08 |
| CDY36869 | Canola | nucleus, plastid | 8.45 | 20.11 |
| CDY36868 | Canola | nucleus | 11.11 | 20.0 |
| CDY40515 | Canola | cytosol | 21.01 | 19.82 |
| CDY32269 | Canola | cytosol | 17.39 | 19.05 |
Protein Annotations
| EnsemblPlants:CDY02766 | EnsemblPlantsGene:GSBRNA2T00114935001 | InterPro:DUF828 | InterPro:PH_pln | PANTHER:PTHR31351 | PANTHER:PTHR31351:SF3 |
| PFAM:PF05703 | PFAM:PF08458 | ProteinID:CDY02766 | ProteinID:CDY02766.1 | SEG:seg | UniParc:UPI0004EEEDA5 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC02g11230D
Coordinates
chrLK031937:-:331409..334346
Molecular Weight (calculated)
45976.9 Da
IEP (calculated)
7.087
GRAVY (calculated)
-0.367
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MELSLALTST DHHHQVNNNP SPSEAHPDTM DFLSREWCNF AVQSLQPDHI IYDRSIVPVE TSIARFQGDL SLVPCGTMDK SMKMDDPDFK PSMPSWKTND
101: VKSWIWMQQA MHPELSYDGF FRKKLKLPWK ITPSIKKWWK EIKAKRKEEV RLQRAEVHAA ISLAGLAAVL AAVASENAGK DGGNGRPTTK ETAVASAAAV
201: VAAQCAEMAE TMGANRDQLS TMIGSAMTGT SVSEILTLTA SATTSLRGAA TLKARRSCKI NRLNGSAPVL PIEDSSDLPP EFDKNTSLLA QGTDLLVETP
301: DAGDFKVRTV SMVLNKDGKV ILKMKKHNLL RTKKECIVTN VHVELYKDSE TEENNIEDTC YLIVLKTNIG DIKLDMADDY GRYKTWVTTI QHMLTLSCSS
401: SFHTNYDLTF YNKN
101: VKSWIWMQQA MHPELSYDGF FRKKLKLPWK ITPSIKKWWK EIKAKRKEEV RLQRAEVHAA ISLAGLAAVL AAVASENAGK DGGNGRPTTK ETAVASAAAV
201: VAAQCAEMAE TMGANRDQLS TMIGSAMTGT SVSEILTLTA SATTSLRGAA TLKARRSCKI NRLNGSAPVL PIEDSSDLPP EFDKNTSLLA QGTDLLVETP
301: DAGDFKVRTV SMVLNKDGKV ILKMKKHNLL RTKKECIVTN VHVELYKDSE TEENNIEDTC YLIVLKTNIG DIKLDMADDY GRYKTWVTTI QHMLTLSCSS
401: SFHTNYDLTF YNKN
001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN
Arabidopsis Description
Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.