Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033702.1-P | Field mustard | cytosol, plastid | 94.01 | 99.76 |
| CDX94730 | Canola | cytosol | 96.9 | 97.33 |
| AT5G43870.1 | Thale cress | plastid | 90.91 | 90.51 |
| CDY14898 | Canola | cytosol | 90.02 | 90.02 |
| CDX96925 | Canola | plastid | 89.36 | 82.24 |
| VIT_05s0020g04020.t01 | Wine grape | nucleus | 66.96 | 65.51 |
| KRG91356 | Soybean | cytosol | 67.85 | 64.29 |
| PGSC0003DMT400016521 | Potato | nucleus | 66.3 | 64.16 |
| Solyc09g082580.2.1 | Tomato | cytosol | 66.08 | 64.09 |
| KRH35470 | Soybean | nucleus | 67.63 | 64.08 |
| CDY50683 | Canola | cytosol, endoplasmic reticulum, nucleus | 64.97 | 63.01 |
| CDY29764 | Canola | nucleus | 61.2 | 62.3 |
| KRH69115 | Soybean | nucleus | 66.08 | 61.32 |
| KRH31661 | Soybean | nucleus | 65.63 | 61.28 |
| CDY36869 | Canola | nucleus, plastid | 23.5 | 60.92 |
| CDY16256 | Canola | cytosol | 53.88 | 60.75 |
| GSMUA_Achr5P02990_001 | Banana | nucleus | 60.53 | 60.13 |
| GSMUA_Achr7P07730_001 | Banana | nucleus | 58.98 | 59.78 |
| GSMUA_Achr4P21170_001 | Banana | cytosol | 48.56 | 59.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.98 | 58.59 |
| TraesCS5B01G381200.1 | Wheat | nucleus | 59.42 | 57.76 |
| TraesCS5A01G377600.1 | Wheat | nucleus | 58.76 | 57.73 |
| TraesCS5D01G387600.1 | Wheat | nucleus | 58.98 | 57.45 |
| HORVU5Hr1G093460.2 | Barley | nucleus | 58.98 | 57.33 |
| GSMUA_Achr4P21160_001 | Banana | cytosol | 11.97 | 55.67 |
| Zm00001d013705_P001 | Maize | cytosol, nucleus, peroxisome | 57.65 | 55.44 |
| KXG37970 | Sorghum | cytosol | 57.43 | 54.99 |
| Zm00001d033283_P001 | Maize | cytosol | 57.43 | 54.87 |
| CDY46598 | Canola | mitochondrion | 58.09 | 54.24 |
| TraesCS5A01G056700.2 | Wheat | nucleus | 56.54 | 54.14 |
| TraesCS5D01G067900.2 | Wheat | nucleus | 56.32 | 54.04 |
| CDY53717 | Canola | nucleus | 58.76 | 53.97 |
| CDX93914 | Canola | nucleus | 58.76 | 53.97 |
| TraesCS5B01G060100.2 | Wheat | nucleus | 56.1 | 53.94 |
| OQU79534 | Sorghum | cytosol, mitochondrion, nucleus | 58.09 | 53.69 |
| CDY36868 | Canola | nucleus | 27.05 | 53.04 |
| Zm00001d030661_P001 | Maize | cytosol | 54.32 | 53.03 |
| Os03t0635800-01 | Rice | nucleus | 43.68 | 52.12 |
| Os12t0604200-00 | Rice | nucleus | 41.02 | 49.87 |
| CDX68890 | Canola | cytosol | 34.81 | 36.77 |
| CDX75286 | Canola | cytosol | 34.59 | 36.53 |
| CDY65120 | Canola | cytosol | 28.6 | 32.01 |
| CDY09634 | Canola | nucleus | 28.82 | 31.78 |
| CDY64500 | Canola | cytosol | 28.16 | 31.51 |
| CDX77767 | Canola | nucleus | 27.72 | 30.79 |
| CDY59298 | Canola | nucleus | 27.27 | 30.3 |
| CDY32269 | Canola | cytosol | 24.83 | 29.63 |
| CDY51283 | Canola | cytosol | 26.39 | 29.02 |
| CDY02766 | Canola | cytosol | 26.61 | 28.99 |
| CDY50798 | Canola | cytosol, endoplasmic reticulum, nucleus | 26.39 | 28.95 |
| CDY40515 | Canola | cytosol | 27.05 | 27.79 |
Protein Annotations
| EnsemblPlants:CDY22328 | EnsemblPlantsGene:GSBRNA2T00018801001 | InterPro:DUF828 | InterPro:PH_pln | PANTHER:PTHR31351 | PANTHER:PTHR31351:SF16 |
| PFAM:PF05703 | PFAM:PF08458 | ProteinID:CDY22328 | ProteinID:CDY22328.1 | SEG:seg | UniParc:UPI0004EEB927 |
| UniProt:A0A078GCB0 | MapMan:35.1 | : | : | : | : |
Description
BnaA06g36500DBnaA06g36500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCB0]
Coordinates
chrLK032130:+:157579..161030
Molecular Weight (calculated)
48585.8 Da
IEP (calculated)
9.793
GRAVY (calculated)
-0.275
Length
451 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKSKTFGGQ WRFNPAFKPP ETPLDSMEFL SRTWSASATE VSRAVVASPT SQPPQMRFSE IQGVSDVTLV PEDEENGIVS GNTFSFASSE TSLMVMERIM
101: AQSPEISSPR TSGRLSHSSF TDSPPISPSE INDFKQFYRV SPSFNGHVRG PSAVSGVAGG SKTVGRWLKD RREKKREETR AQNAQLHAAV SVAGVAAAIA
201: AIAVATASQS SSGSDEQVAK TDSAVASAAT LVAAQCVEAA EIMGADREHL ASVVSSAVNV RSAGDIMTLT AAAATALRGA ATLKARALKE VWNIAAVIPV
301: DKGIPKSRVG GGGGYRSDLA PEDNFLGICS RELLAKGCEL LKRTRKGDLH WKVVSVYINR TNQVTLKMKS KHVAGTLTKK KKNVVVELVK GLPAWPGREL
401: LDDGEDLRYF GLKTLEKRVI EFECKNQREY DLWTQGVSML LSVASDRRHK C
101: AQSPEISSPR TSGRLSHSSF TDSPPISPSE INDFKQFYRV SPSFNGHVRG PSAVSGVAGG SKTVGRWLKD RREKKREETR AQNAQLHAAV SVAGVAAAIA
201: AIAVATASQS SSGSDEQVAK TDSAVASAAT LVAAQCVEAA EIMGADREHL ASVVSSAVNV RSAGDIMTLT AAAATALRGA ATLKARALKE VWNIAAVIPV
301: DKGIPKSRVG GGGGYRSDLA PEDNFLGICS RELLAKGCEL LKRTRKGDLH WKVVSVYINR TNQVTLKMKS KHVAGTLTKK KKNVVVELVK GLPAWPGREL
401: LDDGEDLRYF GLKTLEKRVI EFECKNQREY DLWTQGVSML LSVASDRRHK C
001: MDQKSKTIGE QWWRSNPTFK PPETPLDSME FLSRTWSASA TEVSRAVVAS PPTSQPPQMR FSEIQNGSSD VTLVPEDEEN GIVLGNTFSF ASSETSLMVM
101: ERIMAQSPEI SSPRTSGRLS HSSFTDSPPI SPSDIDDFKQ FYRVSPSFNG HIRGSSAIPG TAGGSKTVGR WLKDRREKKR EETRAQNAQL HAAVSVAGVA
201: AAVAAIAAAT ASQSSSGTDE QVAKNDSAVA SAATLVAAKC VEAAEIMGAD REHLASVVSS AVNVRSAGDI MTLTAAAATA LRGAAQLKAR ALKEVWNIAA
301: VIPVDKGTPK GGGGGYRGGE LAPVDNFLGI CSKELLAKGC ELLKRTRKGD LHWKVVSIYI NRTKQVILKT KSKHVAGTIT KKKKNVVVGL VKGLPAWPGR
401: EMLEGGENLR YFGLKTVEKR VIEFECKSQR EYDLWTQGVS MLLSIASDRK HKC
101: ERIMAQSPEI SSPRTSGRLS HSSFTDSPPI SPSDIDDFKQ FYRVSPSFNG HIRGSSAIPG TAGGSKTVGR WLKDRREKKR EETRAQNAQL HAAVSVAGVA
201: AAVAAIAAAT ASQSSSGTDE QVAKNDSAVA SAATLVAAKC VEAAEIMGAD REHLASVVSS AVNVRSAGDI MTLTAAAATA LRGAAQLKAR ALKEVWNIAA
301: VIPVDKGTPK GGGGGYRGGE LAPVDNFLGI CSKELLAKGC ELLKRTRKGD LHWKVVSIYI NRTKQVILKT KSKHVAGTIT KKKKNVVVGL VKGLPAWPGR
401: EMLEGGENLR YFGLKTVEKR VIEFECKSQR EYDLWTQGVS MLLSIASDRK HKC
Arabidopsis Description
At5g43870 [Source:UniProtKB/TrEMBL;Acc:Q9LKC2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.