Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16256 | Canola | cytosol | 87.83 | 50.5 |
| CDY50683 | Canola | cytosol, endoplasmic reticulum, nucleus | 94.78 | 46.88 |
| Bra039719.1-P | Field mustard | nucleus | 94.35 | 46.67 |
| CDY29764 | Canola | nucleus | 82.17 | 42.66 |
| AT4G14740.1 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 86.96 | 42.11 |
| GSMUA_Achr4P21170_001 | Banana | cytosol | 55.22 | 34.6 |
| KRG91356 | Soybean | cytosol | 66.09 | 31.93 |
| KRH35470 | Soybean | nucleus | 65.65 | 31.72 |
| PGSC0003DMT400016521 | Potato | nucleus | 62.17 | 30.69 |
| VIT_05s0020g04020.t01 | Wine grape | nucleus | 60.43 | 30.15 |
| Solyc09g082580.2.1 | Tomato | cytosol | 60.87 | 30.11 |
| Os03t0635800-01 | Rice | nucleus | 49.13 | 29.89 |
| KRH69115 | Soybean | nucleus | 63.04 | 29.84 |
| KRH31661 | Soybean | nucleus | 62.61 | 29.81 |
| CDY46598 | Canola | mitochondrion | 61.74 | 29.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 57.83 | 29.3 |
| GSMUA_Achr7P07730_001 | Banana | nucleus | 53.91 | 27.87 |
| GSMUA_Achr5P02990_001 | Banana | nucleus | 54.78 | 27.75 |
| CDY22328 | Canola | plastid | 53.04 | 27.05 |
| CDX94730 | Canola | cytosol | 52.17 | 26.73 |
| CDY14898 | Canola | cytosol | 51.3 | 26.16 |
| TraesCS5A01G377600.1 | Wheat | nucleus | 52.17 | 26.14 |
| TraesCS5B01G381200.1 | Wheat | nucleus | 52.61 | 26.08 |
| TraesCS5D01G387600.1 | Wheat | nucleus | 52.17 | 25.92 |
| HORVU5Hr1G093460.2 | Barley | nucleus | 52.17 | 25.86 |
| Zm00001d033283_P001 | Maize | cytosol | 51.3 | 25.0 |
| KXG37970 | Sorghum | cytosol | 50.87 | 24.84 |
| OQU79534 | Sorghum | cytosol, mitochondrion, nucleus | 52.61 | 24.8 |
| Zm00001d013705_P001 | Maize | cytosol, nucleus, peroxisome | 50.0 | 24.52 |
| Zm00001d030661_P001 | Maize | cytosol | 49.13 | 24.46 |
| CDY53717 | Canola | nucleus | 52.17 | 24.44 |
| CDX93914 | Canola | nucleus | 52.17 | 24.44 |
| TraesCS5D01G067900.2 | Wheat | nucleus | 49.13 | 24.04 |
| TraesCS5A01G056700.2 | Wheat | nucleus | 49.13 | 23.99 |
| TraesCS5B01G060100.2 | Wheat | nucleus | 48.7 | 23.88 |
| CDX96925 | Canola | plastid | 50.43 | 23.67 |
| Os12t0604200-00 | Rice | nucleus | 33.91 | 21.02 |
| CDX68890 | Canola | cytosol | 30.43 | 16.39 |
| CDX75286 | Canola | cytosol | 30.43 | 16.39 |
| CDY09634 | Canola | nucleus | 22.17 | 12.47 |
| CDY32269 | Canola | cytosol | 20.43 | 12.43 |
| CDY64500 | Canola | cytosol | 21.74 | 12.41 |
| CDY65120 | Canola | cytosol | 21.74 | 12.41 |
| CDY51283 | Canola | cytosol | 21.3 | 11.95 |
| CDY50798 | Canola | cytosol, endoplasmic reticulum, nucleus | 21.3 | 11.92 |
| CDX77767 | Canola | nucleus | 20.0 | 11.33 |
| CDY40515 | Canola | cytosol | 21.3 | 11.16 |
| CDY02766 | Canola | cytosol | 20.0 | 11.11 |
| CDY59298 | Canola | nucleus | 19.57 | 11.08 |
| CDY36869 | Canola | nucleus, plastid | 2.61 | 3.45 |
| GSMUA_Achr4P21160_001 | Banana | cytosol | 0.87 | 2.06 |
Protein Annotations
| EnsemblPlants:CDY36868 | EnsemblPlantsGene:GSBRNA2T00062938001 | InterPro:DUF828 | PANTHER:PTHR31351 | PANTHER:PTHR31351:SF16 | PFAM:PF05703 |
| ProteinID:CDY36868 | ProteinID:CDY36868.1 | SEG:seg | UniParc:UPI0004EE5071 | UniProt:A0A078HJ50 | MapMan:35.1 |
Description
BnaC08g09790DBnaC08g09790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJ50]
Coordinates
chrLK032385:+:97410..99385
Molecular Weight (calculated)
24671.0 Da
IEP (calculated)
8.512
GRAVY (calculated)
-0.525
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MERSMVPTWR PDPVYRPPET PLEPMEFLAR SWSASALEVS KALTPSDPQI LLSKTEEEPI LGDGDTEESG LVSGNPFSFA SSETSQMVMD RILSQSQEVS
101: PRTSGRLSHS SSGPLNGSLT DSPPPESDEI KQFTRANNSS LNNINCQFRS TATTPGPITA TATQSKTVGR WLKDRREKKK EETRAHNAQI HAAVSVAGVA
201: AAVAAIAAAT PPPPRRRAGR AAGKVNVLVI
101: PRTSGRLSHS SSGPLNGSLT DSPPPESDEI KQFTRANNSS LNNINCQFRS TATTPGPITA TATQSKTVGR WLKDRREKKK EETRAHNAQI HAAVSVAGVA
201: AAVAAIAAAT PPPPRRRAGR AAGKVNVLVI
001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI
Arabidopsis Description
Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.