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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • nucleus 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, peroxisome, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Plant-mPloc:mitochondrion, nucleus, plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr4P00060_001
GSMUA_Achr7P22530_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G63300.1 GSMUA_Achr11P... AT5G13300.1 19363154
AT3G63300.1 GSMUA_Achr4P00060_001 AT5G13300.1 19363154
AT3G63300.1 GSMUA_Achr7P22530_001 AT5G13300.1 19363154
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana nucleus 85.17 83.48
GSMUA_Achr5P02990_001 Banana nucleus 81.57 79.96
GSMUA_Achr4P21160_001 Banana cytosol 16.4 75.26
GSMUA_Achr4P21170_001 Banana cytosol 60.67 73.57
HORVU5Hr1G093460.2 Barley nucleus 70.34 67.46
TraesCS5A01G377600.1 Wheat nucleus 69.44 67.32
TraesCS5B01G381200.1 Wheat nucleus 69.89 67.03
TraesCS5D01G387600.1 Wheat nucleus 69.66 66.95
Zm00001d033283_P001 Maize cytosol 70.56 66.53
KXG37970 Sorghum cytosol 70.34 66.45
VIT_05s0020g04020.t01 Wine grape nucleus 67.87 65.51
Zm00001d013705_P001 Maize cytosol, nucleus, peroxisome 67.87 64.39
KRG91356 Soybean cytosol 68.31 63.87
OQU79534 Sorghum cytosol, mitochondrion, nucleus 69.89 63.73
Os03t0635800-01 Rice nucleus 53.93 63.49
Solyc09g082580.2.1 Tomato cytosol 66.29 63.44
PGSC0003DMT400016521 Potato nucleus 66.29 63.3
TraesCS5A01G056700.2 Wheat nucleus 66.97 63.27
TraesCS5B01G060100.2 Wheat nucleus 66.52 63.11
KRH67258 Soybean nucleus 54.16 63.09
KRH35470 Soybean nucleus 67.42 63.03
TraesCS5D01G067900.2 Wheat nucleus 66.52 62.98
Bra033702.1-P Field mustard cytosol, plastid 59.78 62.59
Os12t0604200-00 Rice nucleus 51.69 61.99
CDY50683 Canola cytosol, endoplasmic reticulum, nucleus 64.27 61.51
Zm00001d030661_P001 Maize cytosol 63.6 61.26
VIT_07s0151g00290.t01 Wine grape nucleus 65.62 61.09
Bra039719.1-P Field mustard nucleus 63.82 61.08
Bra036892.1-P Field mustard nucleus 64.04 60.9
KRH31661 Soybean nucleus 66.07 60.87
KRH69115 Soybean nucleus 66.07 60.49
AT4G14740.1 Thale cress cytosol, endoplasmic reticulum, nucleus 64.27 60.21
AT5G43870.1 Thale cress plastid 61.12 60.04
CDY29764 Canola nucleus 59.33 59.59
CDY16256 Canola cytosol 53.48 59.5
AT3G22810.1 Thale cress cytosol 62.7 59.11
CDX94730 Canola cytosol 59.55 59.02
CDY22328 Canola plastid 59.78 58.98
KRH32056 Soybean nucleus 63.37 58.63
CDY36869 Canola nucleus, plastid 22.92 58.62
CDY14898 Canola cytosol 59.1 58.31
Bra036001.1-P Field mustard nucleus 58.88 58.09
KRH71381 Soybean nucleus 62.7 58.0
PGSC0003DMT400049811 Potato plastid 62.47 57.56
KRG95576 Soybean nucleus 62.25 57.11
Solyc09g065590.2.1 Tomato plastid 62.25 56.88
Bra023803.1-P Field mustard cytosol 58.2 56.3
AT3G63300.1 Thale cress plastid 62.25 55.62
Bra040444.1-P Field mustard plastid 60.67 55.56
CDX93914 Canola nucleus 61.12 55.4
CDY53717 Canola nucleus 60.67 54.99
CDY36868 Canola nucleus 27.87 53.91
CDX96925 Canola plastid 58.65 53.27
CDY46598 Canola mitochondrion 57.75 53.21
GSMUA_Achr8P11040_001 Banana cytosol 32.13 42.69
GSMUA_Achr10P... Banana nucleus 36.18 40.05
GSMUA_Achr11P... Banana nucleus 32.13 36.11
GSMUA_Achr4P02070_001 Banana cytosol 23.82 27.32
GSMUA_Achr10P... Banana cytosol 23.37 26.94
Protein Annotations
EnsemblPlants:GSMUA_Achr7P07730_001EnsemblPlants:GSMUA_Achr7T07730_001EnsemblPlantsGene:GSMUA_Achr7G07730_001InterPro:DUF828InterPro:PH_plnPANTHER:PTHR31351
PANTHER:PTHR31351:SF4PFAM:PF05703PFAM:PF08458SEG:segUniParc:UPI000296FCC2UniProt:M0TFL3
MapMan:35.1:::::
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G07730_001]
Coordinates
chr7:-:5740441..5744259
Molecular Weight (calculated)
47857.5 Da
IEP (calculated)
9.258
GRAVY (calculated)
-0.208
Length
445 amino acids
Sequence
(BLAST)
001: MEFLSRSWSA SALEVSKALG PPPPPPPSLL PPPAGAIPEE EPEELVVVAG NPFTFASSAT SQMVMERIMS QSEVSPLTSG RLSHSSGPLN GGGSLSDSPP
101: VSPCEMDDLK SFFSPCHLIL VVFIPYCRAI ATPKPQHYRG TSKTVGRWLK DRRERKKEET RAQNAQLHAA ISVAGVAAAV AAVAAATAAA SGSGKDDRAA
201: RIDMAVASAA TLVAAQCVEA AESMGAEREH LASVVGSAVN VRTPGDIVTL TAAAATALRG AATLKARALK DVWNIAAVIP VEKGAMGNHN NHHRNKQQKD
301: LESNGSSFGD EFVPEEDNFL GLCSQEFLAK GTDLLKRTRK GALHWKLVSI YINGVGQVML KMKSRHVAGT ITKKKKNVVV EVCKEIQAWP GRHLLQGGEQ
401: RRYFGLRTAE HRVIEFECLS QREHEMWTQG VSRLLNIVNE KKLLT
Best Arabidopsis Sequence Match ( AT3G22810.1 )
(BLAST)
001: MEKPVFAPWR SDQVFRPPET PLEPMEFLSR SWSVSAHEVS KALTPSQQLL SKASIENTTV ILEEPIAAGE TETEDNSFVS GNPFSFACSE TSQMVMDRIL
101: SQSQEVSPRT SGRLSHSSGP LNGSLTDSPP ISPHQVDDIK QFCRSNNNFN SQYRSTGTTP GPITATTTQS KTVGRWLKDR REKKKEEMRA HNAQIHAAVS
201: VAGVAAAVAA IAAATAASSS AGKDENMAKT DMAVASAATL VAAQCVEAAE VMGAERDHLA SVVSSAVNVR SAGDIMTLTA GAATALRGVA TLKARAMKEV
301: WHIASVIPMD KGINLGGCSN VNGNGSYVSS SSSHSGEFLV EDNFLGHCNR EWLARGGQLL KRTRKGDLHW KIVSVYINRL NQVILKMKSR HVGGTFTKKN
401: KNVVIDVIKN VQAWPGRHLL EGGEDLRYFG LKTVPRGIVE FQCKSQREYE MWTQGVSRLI AVAAERNNRY RI
Arabidopsis Description
Auxin canalization protein (DUF828) [Source:UniProtKB/TrEMBL;Acc:Q9LUI0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.