Factsheet for Bra036001.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14898	Canola	cytosol	99.78	99.78
Bra033702.1-P	Field mustard	cytosol, plastid	84.92	90.12
CDX96925	Canola	plastid	97.78	90.0
AT5G43870.1	Thale cress	plastid	87.8	87.42
VIT_05s0020g04020.t01	Wine grape	nucleus	64.3	62.91
KRG91356	Soybean	cytosol	66.3	62.82
PGSC0003DMT400016521	Potato	nucleus	64.52	62.45
KRH35470	Soybean	nucleus	65.85	62.4
Solyc09g082580.2.1	Tomato	cytosol	64.3	62.37
Bra036892.1-P	Field mustard	nucleus	63.41	61.11
Bra039719.1-P	Field mustard	nucleus	62.97	61.08
GSMUA_Achr5P02990_001	Banana	nucleus	60.53	60.13
KRH31661	Soybean	nucleus	63.86	59.63
KRH69115	Soybean	nucleus	64.08	59.47
GSMUA_Achr4P21170_001	Banana	cytosol	48.12	59.13
GSMUA_Achr7P07730_001	Banana	nucleus	58.09	58.88
GSMUA_AchrUn_...	Banana	nucleus	58.54	58.15
GSMUA_Achr4P21160_001	Banana	cytosol	12.42	57.73
TraesCS5B01G381200.1	Wheat	nucleus	58.54	56.9
TraesCS5A01G377600.1	Wheat	nucleus	57.87	56.86
TraesCS5D01G387600.1	Wheat	nucleus	58.09	56.59
HORVU5Hr1G093460.2	Barley	nucleus	57.65	56.03
Bra023803.1-P	Field mustard	cytosol	56.76	55.65
TraesCS5A01G056700.2	Wheat	nucleus	56.98	54.56
TraesCS5D01G067900.2	Wheat	nucleus	56.76	54.47
Zm00001d013705_P001	Maize	cytosol, nucleus, peroxisome	56.54	54.37
TraesCS5B01G060100.2	Wheat	nucleus	56.54	54.37
KXG37970	Sorghum	cytosol	56.76	54.35
Zm00001d033283_P001	Maize	cytosol	56.54	54.03
Bra040444.1-P	Field mustard	plastid	57.87	53.7
OQU79534	Sorghum	cytosol, mitochondrion, nucleus	58.09	53.69
Zm00001d030661_P001	Maize	cytosol	53.22	51.95
Os03t0635800-01	Rice	nucleus	42.35	50.53
Os12t0604200-00	Rice	nucleus	40.35	49.06
Bra011382.1-P	Field mustard	cytosol	34.37	36.3
Bra026246.1-P	Field mustard	nucleus	27.94	31.27
Bra024944.1-P	Field mustard	cytosol	27.05	30.12
Bra020413.1-P	Field mustard	cytosol	26.61	29.06
Bra002698.1-P	Field mustard	cytosol	25.94	28.68
Bra038497.1-P	Field mustard	nucleus	26.61	27.84

Protein Annotations

EnsemblPlants:Bra036001.1	EnsemblPlants:Bra036001.1-P	EnsemblPlantsGene:Bra036001	InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351
PANTHER:PTHR31351:SF16	PFAM:PF05703	PFAM:PF08458	SEG:seg	UniParc:UPI000253E66A	UniProt:M4F4K1
MapMan:35.1	:	:	:	:	:

Description

AT5G43870 (E=2e-157) | phosphoinositide binding

Coordinates

chrScaffold000111:-:410865..415102

Molecular Weight (calculated)

48511.6 Da

IEP (calculated)

8.920

GRAVY (calculated)

-0.231

Length

451 amino acids

Sequence
(BLAST)

001: MDKGKTFGEQ WRFSPSFKPP ETPLNSMEFL SRAWSASATE VTRAVVASPT FQPPQMRFSE IQSASDVTLL PEDEENGIVS GNTFSFASSE TSLMVMERIM
101: AQSPDISSPR TSGRLSHSSF TESPPISPSD IDDFKQFYRI SPSFSGHIRG PSAVSGVAGG SKTVGRWLKD RREKKREETR AQNAQLHAAV SVASVAAAVA
201: AIAVATASQS SSGNDEQVAQ TDSAVASAAT LVAAQCVEAA QIMGADREHL ASVVSSAVNV RSAGDIMTLT AAAATALRGA ATLKARAFKE VWNIAAVIPV
301: EKGIPKGGES SGGGGGYQGC LTPEDNFLGI CSRELLAKGC ELLKRTREGD LHWKVVSVYI NRTKQVILKM KSKHVAGTIT KKKKYVVVEL VKGLTAWPGR
401: ELLEGGEDLR YFGLKTLEKR VIEFECKSQR EYDLWTQGVS MLISLASDSR H

Best Arabidopsis Sequence Match ( AT5G43870.1 )
(BLAST)

001: MDQKSKTIGE QWWRSNPTFK PPETPLDSME FLSRTWSASA TEVSRAVVAS PPTSQPPQMR FSEIQNGSSD VTLVPEDEEN GIVLGNTFSF ASSETSLMVM
101: ERIMAQSPEI SSPRTSGRLS HSSFTDSPPI SPSDIDDFKQ FYRVSPSFNG HIRGSSAIPG TAGGSKTVGR WLKDRREKKR EETRAQNAQL HAAVSVAGVA
201: AAVAAIAAAT ASQSSSGTDE QVAKNDSAVA SAATLVAAKC VEAAEIMGAD REHLASVVSS AVNVRSAGDI MTLTAAAATA LRGAAQLKAR ALKEVWNIAA
301: VIPVDKGTPK GGGGGYRGGE LAPVDNFLGI CSKELLAKGC ELLKRTRKGD LHWKVVSIYI NRTKQVILKT KSKHVAGTIT KKKKNVVVGL VKGLPAWPGR
401: EMLEGGENLR YFGLKTVEKR VIEFECKSQR EYDLWTQGVS MLLSIASDRK HKC

Arabidopsis Description

At5g43870 [Source:UniProtKB/TrEMBL;Acc:Q9LKC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.