Factsheet for Bra040444.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra008838.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63300.1	Bra008838.1-P	AT5G13300.1	19363154

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53717	Canola	nucleus	100.0	98.98
AT3G63300.1	Thale cress	plastid	88.27	86.14
KRH67258	Soybean	nucleus	52.47	66.75
KRH71381	Soybean	nucleus	62.35	62.99
KRG95576	Soybean	nucleus	62.76	62.89
KRH32056	Soybean	nucleus	61.52	62.16
VIT_07s0151g00290.t01	Wine grape	nucleus	60.91	61.92
GSMUA_Achr5P02990_001	Banana	nucleus	57.61	61.67
Bra036892.1-P	Field mustard	nucleus	58.85	61.11
GSMUA_Achr4P21170_001	Banana	cytosol	46.09	61.04
PGSC0003DMT400049811	Potato	plastid	60.49	60.87
Bra033702.1-P	Field mustard	cytosol, plastid	53.09	60.71
GSMUA_Achr7P07730_001	Banana	nucleus	55.56	60.67
Bra039719.1-P	Field mustard	nucleus	57.82	60.43
Solyc09g065590.2.1	Tomato	plastid	60.49	60.37
GSMUA_AchrUn_...	Banana	nucleus	56.17	60.13
TraesCS5A01G377600.1	Wheat	nucleus	55.56	58.82
TraesCS5B01G381200.1	Wheat	nucleus	55.76	58.41
TraesCS5D01G387600.1	Wheat	nucleus	55.56	58.32
Bra036001.1-P	Field mustard	nucleus	53.7	57.87
HORVU5Hr1G093460.2	Barley	nucleus	55.14	57.76
GSMUA_Achr4P21160_001	Banana	cytosol	11.32	56.7
OQU79534	Sorghum	cytosol, mitochondrion, nucleus	56.38	56.15
TraesCS5A01G056700.2	Wheat	nucleus	54.12	55.84
TraesCS5D01G067900.2	Wheat	nucleus	53.91	55.74
Zm00001d033283_P001	Maize	cytosol	54.12	55.72
TraesCS5B01G060100.2	Wheat	nucleus	53.7	55.65
Bra023803.1-P	Field mustard	cytosol	52.47	55.43
KXG37970	Sorghum	cytosol	53.7	55.41
Zm00001d030661_P001	Maize	cytosol	52.47	55.19
Zm00001d013705_P001	Maize	cytosol, nucleus, peroxisome	52.88	54.8
Os03t0635800-01	Rice	nucleus	42.59	54.76
Os12t0604200-00	Rice	nucleus	40.33	52.83
Bra011382.1-P	Field mustard	cytosol	31.89	36.3
Bra026246.1-P	Field mustard	nucleus	26.13	31.51
Bra024944.1-P	Field mustard	cytosol	24.69	29.63
Bra020413.1-P	Field mustard	cytosol	24.49	28.81
Bra038497.1-P	Field mustard	nucleus	24.9	28.07
Bra002698.1-P	Field mustard	cytosol	23.46	27.94

Protein Annotations

MapMan:35.1	EnsemblPlantsGene:Bra040444	EnsemblPlants:Bra040444.1	EnsemblPlants:Bra040444.1-P	InterPro:DUF828	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	GO:GO:0009734
GO:GO:0009987	GO:GO:0010087	GO:GO:0010305	UniProt:M4FH66	PFAM:PF05703	PFAM:PF08458
InterPro:PH_pln	PANTHER:PTHR31351	PANTHER:PTHR31351:SF8	UniParc:UPI0002545262	SEG:seg	:

Description

AT3G63300 (E=2e-159) | phosphoinositide binding

Coordinates

chrA04:+:69998..72549

Molecular Weight (calculated)

51772.1 Da

IEP (calculated)

9.884

GRAVY (calculated)

-0.402

Length

486 amino acids

Sequence
(BLAST)

001: MRRPNPINSS RRPDIGAGST QLPESPRGPM EFLSRSWSVS ALEVSRALHT AKTAGPSTTR TPSLNASIPE ETNPEKEECQ AENSSQFSFA ASATSQLVLE
101: RIMSQSEVSP LTSGRLSHSS GPLNGGGSFT ETDSPPISPS DDFDDVVKYF RSHNTIQPLF TGTGGTRGTT GNGSNTPVAG APPKTVGRWL KDRKEKKKEE
201: SRAHNAHVHA AVSVAAVASA VAAIAAATAA SSQGKNEQMA RVDMAMASAA ALVAAQCVEA AENMGAERDH LTSVVSSAVN VKSHDDIVTL TAAAATALRG
301: AATLKARALK EVWNIAAALP ADKGASSALC GQVETKHSGS SFSGELPIAG EDFLGVCNQE LLAKGAELLK RTRGGDLHWK IVSVYMNKAG QVVLKMKSKH
401: VGGTFTKKKK HMVVEVKKDI AAWAGRDLFN GDKHHYFGLK TETKRVIEFE CRNEREYDIW TQGVSRLVAI AAERKQKNSM SKWTAP

Best Arabidopsis Sequence Match ( AT3G63300.1 )
(BLAST)

001: MERELRRPNP INSSRRPEIF SSGGSSTQLP ESPRGPMEFL SRSWSVSALE VSRALHTAKS ASATNRPPSS INTPIPEETL NPEKEECPPE NSTSVSSQFS
101: FAASATSQLV LERIMSQSEV SPLTSGRLSH SSGPLNGGGS FTETDSPPIS PSDEFDDVIK YFRTHNTIHP LFSGTGGSRG TTGNGSNTPM AGTGPKTVGR
201: WLKDRKEKKK EETRTQNAQV HAAVSVAAVA SAVAAVAAAT AASSPGKNEQ MARIDMAMAS AAALVAAQCV EAAEIMGADR DHLTSVVSSA VNVKSHDDIV
301: TLTAAAATAL RGAATLKARA LKEVWNIAAV LPAEKGASSA LCGQVDTKHS DSSFSGELPV AGEDFLGVCN QELLAKGTEL LKRTRGGELH WKIVSVYINK
401: AGQAVLKMKS KHVGGTFTKK KKHMVLEVRK DIPAWAGRDL FNGDKHHYFG LKTETKRVIE FECRNQREYE IWTQGVSRLL AIAAEKKQKS SMSKWMAP

Arabidopsis Description

VABVAN3-binding protein [Source:UniProtKB/Swiss-Prot;Acc:Q8W4K5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.