Factsheet for Bra020413.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02766	Canola	cytosol	96.85	96.62
AT5G57770.1	Thale cress	cytosol	89.35	90.89
Bra002698.1-P	Field mustard	cytosol	87.17	88.24
VIT_11s0037g01240.t01	Wine grape	cytosol	57.87	60.97
VIT_11s0037g01110.t01	Wine grape	cytosol	55.21	60.64
Solyc07g006320.2.1	Tomato	cytosol	56.9	60.26
KRH18946	Soybean	nucleus	56.42	60.21
KRH02952	Soybean	cytosol	55.93	60.16
PGSC0003DMT400029034	Potato	cytosol	56.17	59.49
Os04t0498000-01	Rice	cytosol	15.25	55.26
GSMUA_Achr4P02070_001	Banana	cytosol	41.89	44.59
GSMUA_Achr10P...	Banana	cytosol	40.19	43.01
TraesCS2D01G352200.1	Wheat	cytosol	41.16	40.38
TraesCS2A01G355900.2	Wheat	cytosol	41.16	40.38
OQU81872	Sorghum	cytosol	38.98	39.95
TraesCS2B01G372200.1	Wheat	cytosol	40.44	39.67
Zm00001d003160_P001	Maize	cytosol	37.77	38.61
Zm00001d025771_P001	Maize	cytosol	38.98	37.7
Bra033702.1-P	Field mustard	cytosol, plastid	28.33	27.53
Bra036001.1-P	Field mustard	nucleus	29.06	26.61
Bra039719.1-P	Field mustard	nucleus	28.81	25.59
Bra023803.1-P	Field mustard	cytosol	28.33	25.43
Bra036892.1-P	Field mustard	nucleus	28.57	25.21
Bra040444.1-P	Field mustard	plastid	28.81	24.49
Bra011382.1-P	Field mustard	cytosol	24.94	24.12
Bra024944.1-P	Field mustard	cytosol	23.24	23.7
Bra026246.1-P	Field mustard	nucleus	22.28	22.83
Bra038497.1-P	Field mustard	nucleus	20.82	19.95

Protein Annotations

EnsemblPlants:Bra020413.1	EnsemblPlants:Bra020413.1-P	EnsemblPlantsGene:Bra020413	InterPro:DUF828	InterPro:PH_pln	PANTHER:PTHR31351
PANTHER:PTHR31351:SF3	PFAM:PF05703	PFAM:PF08458	SEG:seg	UniParc:UPI0002545D0B	UniProt:M4DV70
MapMan:35.2	:	:	:	:	:

Description

AT5G57770 (E=3e-155) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Pleckstrin-like, plant (InterPro:IPR013666), Protein of unknown function DUF828, plant (InterPro:IPR008546); Has 104 Blast hits to 104 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Coordinates

chrA02:+:6603216..6605259

Molecular Weight (calculated)

45811.8 Da

IEP (calculated)

7.573

GRAVY (calculated)

-0.348

Length

413 amino acids

Sequence
(BLAST)

001: MELSLALTST DHHHQVNNNP SPSEAHPDTM DFLSREWCNF AVQSLQPDHI IYDRSIVPVG TSIARFQGDL SLVPCGTMDK SMKMDDPDFK PSMPSWKTND
101: VKSWIWMQQA MHPELSYDGF FRKKLKLPWK ITPSIKKWWK EIKAKRKEEV RLQRAEVHAA VSLAGLAAAL AAIASENAGK DGGNGRPTTK ETAVASAAAV
201: VAAQCAEMAE TMGANRDQLS TMIGSAMTGT SVSEILTLTA SATTSLRGAA TLKARRSCKI NRLNGSAPVL PIEDSSDLPP EFDKNTSLLA QGTDLFVETP
301: DGDFKVRTVS MILNKDAKVI LKMKKHNLLR TKKECIVTNV HVELYKDSET EENNMEDTCY LIVLKTNIGA IKIDMADDYA RYKTWVTTVQ HMLALSCSSS
401: FHTNYDLTFY NKN

Best Arabidopsis Sequence Match ( AT5G57770.1 )
(BLAST)

001: MELSLALTST DHNPSPSEAH PDTMDFLSRE WCNFAVQSLH PDPILYDRSI VPVETSIAKF QGDSSPVSCA MMDTSMKMDD PDFKPSMPSW KTNDVKSWIW
101: MQQAMHPELS YEGFFRKKLK LPWKITPSIK KWWKEIKAKR KEEVRLQRAE VHAAVSLAGL AAALAAVASE NAGKDGGNGR PSTRETAVAS AAAVVAAQCA
201: QMAETMGANR DQLSTMIGSA MTGTSVSEIL TLTASATTSL RGAATLKARR GCKINRLNGS APVLPIEDSS YLPPEFDKNT SVLAKGTDLF VETPDGDFKA
301: RTVSMVLNKD GKVILKMKKH NLLRTKKESI VTNVHVELYK DSDSEDNNIE DTCYLIVLRT NRGAIKLDMA DDYNRYKTWV TTIQHMLTLS SSSLSTNYAL
401: TFYNKN

Arabidopsis Description

Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region [Source:TAIR;Acc:AT5G57770]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.